SMTL ID : 5qce.2 (1 other biounit)

Crystal structure of human Cathepsin-S with bound ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.78 Å

Oligo State

monomer

Ligands

1 x BJD: N-benzyl-1-{2-chloro-5-[(2-chloro-5-{5-(methylsulfonyl)-1-[3-(morpholin-4-yl)propyl]-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl}phenyl)ethynyl]phenyl}methanamine(Non-covalent)

BJD.1: 16 residues within 4Å: Chain A: G.24, S.26, C.67, N.68, G.69, G.70, F.71, M.72, T.74, G.138, N.162, V.163, N.164, H.165, G.166, F.212 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.71, A:F.71, A:V.163, A:F.212, A:F.212 Hydrogen bonds: A:V.163 Water bridges: A:N.68, A:G.69 pi-Stacking: A:F.71, A:F.212 Halogen bonds: A:C.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bembenek, S.D. et al., Crystal structure of human Cathepsin-S with bound ligand. To be published

Release Date

2017-12-20

Peptides

Cathepsin S: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cathepsin S

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