SMTL ID : 5qcg.1 (1 other biounit)

Crystal structure of human Cathepsin-S with bound ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: Q.20, G.24, A.25, S.26, N.164, H.165 Ligands: BJJ.2 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.20, A:S.26, A:S.26, A:N.164 Salt bridges: A:H.165

1 x BJJ: N-benzyl-1-{2-chloro-5-[2-(2-chloro-5-{5-(methylsulfonyl)-1-[3-(morpholin-4-yl)propyl]-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl}phenyl)ethyl]phenyl}methanamine(Non-covalent)

BJJ.2: 12 residues within 4Å: Chain A: F.71, M.72, T.74, A.141, R.142, N.162, V.163, N.164, H.165, G.166, F.212 Ligands: SO4.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.71, A:R.142, A:V.163, A:F.212 Hydrogen bonds: A:V.163 pi-Stacking: A:F.212

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bembenek, S.D. et al., Crystal structure of human Cathepsin-S with bound ligand. To be published

Release Date

2017-12-20

Peptides

Cathepsin S: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin S

Related Entries With Identical Sequence