SMTL ID : 5qbx.1 (1 other biounit)

Crystal structure of human Cathepsin-S with bound ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x B8V: (2S)-1-[4-(2-methoxyphenyl)piperidin-1-yl]-3-{3-[3-{[2-(piperidin-1-yl)ethyl]sulfanyl}-4-(trifluoromethyl)phenyl]-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-1-yl}propan-2-ol(Non-covalent)

B8V.1: 18 residues within 4Å: Chain A: W.27, K.61, Y.62, G.63, K.65, N.68, G.69, G.70, F.71, M.72, T.74, V.137, G.138, V.163, N.164, H.165, G.166, F.212 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:K.65, A:F.71, A:F.71, A:V.163, A:V.163, A:F.212, A:F.212 pi-Stacking: A:F.212 Halogen bonds: A:V.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bembenek, S.D. et al., Crystal structure of human Cathepsin-S with bound ligand. To be published

Release Date

2017-12-20

Peptides

Cathepsin S: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin S

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