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SMTL ID : 5uln.1

Synthesis of novel seleno ureido containing compounds as SLC-0111 analogs. Investigations on carbonic anhydrases activity, glutathione peroxidase and X-ray crystallography

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: 8JS.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2:

8 residues within 4Å:

Chain A: N.62, H.64, A.65, N.67, Q.92, H.94, T.199
Ligands: 8JS.3

5 PLIP interactions:

5 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:N.67, A:Q.92
Water bridges: A:T.199

1 x 8JS: 4-{[(4-fluorophenyl)carbamothioyl]amino}benzene-1-sulfonamide(Non-covalent)

8JS.3:

14 residues within 4Å:

Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, V.142, L.197, T.198, T.199, P.201, W.208
Ligands: ZN.1, GOL.2

8 PLIP interactions:

8 interactions with chain A

Hydrophobic interactions: A:V.121, A:F.130, A:L.197, A:L.197, A:P.201
Hydrogen bonds: A:T.198, A:T.198
Water bridges: A:T.199

2 x NA: SODIUM ION(Non-functional Binders)

NA.4:	4 residues within 4Å: Chain A: P.185, E.213, P.214, I.215 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.213 Water bridges: A:E.186, A:S.216
NA.5:	6 residues within 4Å: Chain A: L.44, K.45, P.46, L.47, Y.190, S.258 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.47, A:Y.190, A:Y.190

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Angeli, A. et al., Discovery of New Selenoureido Analogues of 4-(4-Fluorophenylureido)benzenesulfonamide as Carbonic Anhydrase Inhibitors. ACS Med Chem Lett (2017)

Release Date

2017-10-11

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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