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SMTL ID : 6c7w.1

Carbonic anhydrase 2 in complex with [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDRO-2-FURANYL]METHYL SULFAMATE inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.28 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

5 residues within 4Å:

Chain A: H.94, H.96, H.119, T.198
Ligands: LMS.2

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x LMS: [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDRO-2-FURANYL]METHYL SULFAMATE(Non-covalent)

LMS.2:

13 residues within 4Å:

Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, V.134, L.197, T.198, T.199, P.201, W.208
Ligands: ZN.1

9 PLIP interactions:

9 interactions with chain A

Hydrogen bonds: A:Q.92, A:H.94, A:T.198, A:T.198, A:T.199
Water bridges: A:N.67, A:N.67
Salt bridges: A:H.94, A:H.119

1 x NA: SODIUM ION(Non-functional Binders)

NA.3:

4 residues within 4Å:

Chain A: P.185, E.213, P.214, I.215

4 PLIP interactions:

4 interactions with chain A

Hydrogen bonds: A:E.213
Water bridges: A:K.153, A:E.186, A:S.216

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Mujumdar, P. et al., Synthesis, structure and bioactivity of primary sulfamate-containing natural products. Bioorg. Med. Chem. Lett. (2018)

Release Date

2018-05-23

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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