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SMTL ID : 6lv2.1

Co- Carbonic Anhydrase II pH 7.8 20 atm CO2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x CO2: CARBON DIOXIDE(Non-covalent)

CO2.1:

8 residues within 4Å:

Chain A: F.95, W.97, A.116, L.147, L.156, V.217, V.222, F.225

No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2:

6 residues within 4Å:

Chain A: Y.7, P.13, D.242, W.244, R.245, P.246

2 PLIP interactions:

2 interactions with chain A

Hydrogen bonds: A:Y.7, A:D.242

1 x CO: COBALT (II) ION(Non-covalent)

CO.3:

5 residues within 4Å:

Chain A: H.94, H.96, H.119, T.198
Ligands: BCT.4

4 PLIP interactions:

3 interactions with chain A, 1 Ligand-Water interactions

Metal complexes: A:H.94, A:H.96, A:H.119, H₂O.4

1 x BCT: BICARBONATE ION(Non-functional Binders)

BCT.4:

10 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, V.121, V.142, L.197, T.198, W.208
Ligands: CO.3

4 PLIP interactions:

4 interactions with chain A

Hydrogen bonds: A:H.94, A:H.119
Water bridges: A:H.96, A:T.198

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Kim, J.K. et al., Elucidating the role of metal ions in carbonic anhydrase catalysis. Nat Commun (2020)

Release Date

2020-08-19

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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