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SMTL ID : 6ufc.1

Carbonic anhydrase 2 with inhibitor (2Z)-2-[(4-methoxyphenyl)methylidene]-3-oxo-N-(4-sulfamoylphenyl)butanamide (11d/D4)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.32 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: Q6A.2

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x Q6A: (2Z)-2-[(4-methoxyphenyl)methylidene]-3-oxo-N-(4-sulfamoylphenyl)butanamide(Non-covalent)

Q6A.2:

17 residues within 4Å:

Chain A: N.67, Q.92, H.94, H.96, H.119, V.121, F.130, V.134, V.142, L.197, T.198, T.199, P.201, L.203, W.208
Ligands: ZN.1, GOL.3

11 PLIP interactions:

11 interactions with chain A

Hydrophobic interactions: A:V.121, A:F.130, A:L.197, A:L.197, A:P.201
Hydrogen bonds: A:N.67, A:Q.92, A:T.198, A:T.198
Water bridges: A:T.199, A:T.199

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3:

8 residues within 4Å:

Chain A: N.62, H.64, A.65, N.67, Q.92, H.94, T.199
Ligands: Q6A.2

4 PLIP interactions:

4 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:Q.92
Water bridges: A:T.199

1 x NA: SODIUM ION(Non-functional Binders)

NA.4:

3 residues within 4Å:

Chain A: R.89, W.123, G.128

2 PLIP interactions:

2 interactions with chain A

Hydrogen bonds: A:D.72, A:R.89

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Fares, M. et al., Discovery of Potent Dual-Tailed Benzenesulfonamide Inhibitors of Human Carbonic Anhydrases Implicated in Glaucoma and in Vivo Profiling of Their Intraocular Pressure-Lowering Action. J.Med.Chem. (2020)

Release Date

2020-08-05

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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