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SMTL ID : 6ufd.1

Carbonic anhydrase 2 with inhibitor (2Z)-3-oxo-N-(4-sulfamoylphenyl)-2-[(thiophen-2-yl)methylidene]butanamide (11g/D7)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: Q6D.5

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2:	8 residues within 4Å: Chain A: N.62, H.64, A.65, N.67, Q.92, H.94, T.199 Ligands: Q6D.5 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.62, A:N.67, A:Q.92 Water bridges: A:T.199
GOL.3:	2 residues within 4Å: Chain A: H.17, K.24 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.24, A:K.24
GOL.4:	4 residues within 4Å: Chain A: Y.7, D.242, W.244, P.246 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.7, A:D.242

1 x Q6D: (2Z)-3-oxo-N-(4-sulfamoylphenyl)-2-[(thiophen-2-yl)methylidene]butanamide(Non-covalent)

Q6D.5:

16 residues within 4Å:

Chain A: N.67, Q.92, H.94, H.96, H.119, V.121, F.130, V.134, V.142, L.197, T.198, T.199, P.201, W.208
Ligands: ZN.1, GOL.2

10 PLIP interactions:

10 interactions with chain A

Hydrophobic interactions: A:V.121, A:L.197
Hydrogen bonds: A:N.67, A:Q.92, A:T.198, A:T.198
Water bridges: A:N.62, A:T.199, A:T.199
pi-Stacking: A:F.130

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6:

2 residues within 4Å:

Chain A: Y.114, P.214

Ligand excluded by PLIP

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Fares, M. et al., Discovery of Potent Dual-Tailed Benzenesulfonamide Inhibitors of Human Carbonic Anhydrases Implicated in Glaucoma and in Vivo Profiling of Their Intraocular Pressure-Lowering Action. J.Med.Chem. (2020)

Release Date

2020-08-05

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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