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SMTL ID : 6wq7.1

Carbonic Anhydrase II Complexed with 2-((3-Aminopropyl)(phenethyl)amino)-N-(4-fluorobenzyl)-N-(4-sulfamoylphenethyl)acetamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1:

6 residues within 4Å:

Chain A: Y.7, P.13, Q.103, D.242, W.244, P.246

2 PLIP interactions:

2 interactions with chain A

Hydrogen bonds: A:D.242, A:W.244

1 x ZN: ZINC ION(Non-covalent)

ZN.2:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: U6V.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x U6V: N~2~-(3-aminopropyl)-N-[(4-fluorophenyl)methyl]-N~2~-(2-phenylethyl)-N-[2-(4-sulfamoylphenyl)ethyl]glycinamide(Non-covalent)

U6V.3:

23 residues within 4Å:

Chain A: W.5, F.20, L.60, N.62, H.64, Q.92, H.94, H.96, E.106, H.119, V.121, F.130, G.131, V.134, V.142, L.197, T.198, T.199, P.200, P.201, L.203, W.208
Ligands: ZN.2

10 PLIP interactions:

10 interactions with chain A

Hydrophobic interactions: A:F.20, A:F.20, A:V.121, A:F.130, A:L.197, A:L.197
Hydrogen bonds: A:N.62, A:T.198
Water bridges: A:N.62, A:T.199

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Bonardi, A. et al., Sulfonamide Inhibitors of Human Carbonic Anhydrases Designed through a Three-Tails Approach: Improving Ligand/Isoform Matching and Selectivity of Action. J.Med.Chem. (2020)

Release Date

2020-06-24

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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