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SMTL ID : 6wq8.1

Carbonic Anhydrase II Complexed with 3-((2-((Furan-2-ylmethyl)(4-sulfamoylphenethyl)amino)-2-oxoethyl)(phenethyl)amino)propanoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1:

8 residues within 4Å:

Chain A: Y.7, G.12, P.13, Q.103, D.242, W.244, R.245, P.246

2 PLIP interactions:

2 interactions with chain A

Hydrogen bonds: A:D.242, A:W.244

1 x ZN: ZINC ION(Non-covalent)

ZN.2:

7 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: U77.3, GOL.5

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

2 x U77: N-(2-{[(furan-2-yl)methyl][2-(4-sulfamoylphenyl)ethyl]amino}-2-oxoethyl)-N-(2-phenylethyl)-beta-alanine(Non-covalent)

U77.3:	23 residues within 4Å: Chain A: L.60, N.67, I.91, Q.92, H.94, H.96, E.106, H.119, V.121, D.129, F.130, G.131, V.134, V.142, L.197, T.198, T.199, P.200, P.201, L.203, W.208 Ligands: ZN.2, GOL.5 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.121, A:F.130, A:F.130, A:V.134, A:L.197 Hydrogen bonds: A:T.198, A:T.198 Water bridges: A:N.67, A:N.67, A:N.67
U77.4:	9 residues within 4Å: Chain A: H.4, W.5, H.10, N.11, H.15, W.16, K.18, D.19, F.20 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:H.4, A:H.10, A:N.11, A:H.15 Hydrogen bonds: A:N.11, A:D.19, A:D.19, A:D.19 Salt bridges: A:H.4 pi-Cation interactions: A:H.10

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5:

11 residues within 4Å:

Chain A: W.5, N.62, H.64, A.65, N.67, Q.92, H.94, H.96, T.199
Ligands: ZN.2, U77.3

6 PLIP interactions:

6 interactions with chain A

Hydrogen bonds: A:N.62, A:N.62, A:N.67, A:Q.92
Water bridges: A:H.64, A:T.199

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Bonardi, A. et al., Sulfonamide Inhibitors of Human Carbonic Anhydrases Designed through a Three-Tails Approach: Improving Ligand/Isoform Matching and Selectivity of Action. J.Med.Chem. (2020)

Release Date

2020-06-24

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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