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SMTL ID : 7aeq.1

Human carbonic anhydrase II in complex with 2,3,5,6-tetrafluoro-4-(2-hydroxyethylsulfanyl)-N-methyl-benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: R8N.2

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x R8N: 2,3,5,6-tetrakis(fluoranyl)-4-(2-hydroxyethylsulfanyl)-~{N}-methyl-benzenesulfonamide(Non-covalent)

R8N.2:

14 residues within 4Å:

Chain A: N.67, I.91, Q.92, H.94, H.96, H.119, V.121, F.130, L.140, L.197, T.198, T.199, W.208
Ligands: ZN.1

6 PLIP interactions:

6 interactions with chain A

Hydrogen bonds: A:T.198, A:T.198, A:T.199
Water bridges: A:E.69, A:T.199
Halogen bonds: A:N.67

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3:

6 residues within 4Å:

Chain A: L.163, D.164, K.167, K.224, K.227, L.228

3 PLIP interactions:

3 interactions with chain A

Hydrophobic interactions: A:K.227
Water bridges: A:D.164
Salt bridges: A:D.164

3 x NA: SODIUM ION(Non-functional Binders)

NA.4:	1 residues within 4Å: Chain A: G.234 2 PLIP interactions: 2 interactions with chain A Water bridges: A:G.234, A:G.234
NA.5:	2 residues within 4Å: Chain A: D.161, D.164 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.161
NA.6:	2 residues within 4Å: Chain A: S.219, E.220 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.219

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Baronas, D. et al., Structure and mechanism of secondary sulfonamide binding to carbonic anhydrases. Eur.Biophys.J. (2021)

Release Date

2021-09-01

Peptides

carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

carbonic anhydrase 2

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