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SMTL ID : 7asj.1

Crystal structure for the complex of human carbonic anhydrase II and 3-(3-methyl-3-phenethylureido)benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.43 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

5 residues within 4Å:

Chain A: H.94, H.96, H.119, T.198
Ligands: RWH.4

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2:

8 residues within 4Å:

Chain A: N.62, H.64, A.65, N.67, Q.92, H.94, T.199
Ligands: RWH.4

6 PLIP interactions:

6 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:Q.92
Water bridges: A:H.64, A:T.199, A:T.199

1 x NA: SODIUM ION(Non-functional Binders)

NA.3:

1 residues within 4Å:

Chain A: H.36

1 PLIP interactions:

1 interactions with chain A

Hydrogen bonds: A:H.36

1 x RWH: 3-(3-methyl-3-phenethylureido)benzenesulfonamide(Non-covalent)

RWH.4:

15 residues within 4Å:

Chain A: W.5, Q.92, H.94, H.96, H.119, V.121, V.142, L.197, T.198, T.199, P.200, P.201, W.208
Ligands: ZN.1, GOL.2

7 PLIP interactions:

7 interactions with chain A

Hydrophobic interactions: A:V.121, A:V.121, A:P.201
Hydrogen bonds: A:T.198, A:T.198, A:T.199, A:T.199

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Vannozzi, G. et al., One-Pot Procedure for the Synthesis of Asymmetric Substituted Ureido Benzene Sulfonamides as Effective Inhibitors of Carbonic Anhydrase Enzymes. J.Med.Chem. (2022)

Release Date

2021-11-24

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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