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SMTL ID : 7rre.1

Carbonic Anhydrase II in complex with Beta-Galactose-2C

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.44 Å

Oligo State

monomer

Ligands

1 x 6IV: 2-[1-(1,1,3-trioxo-2,3-dihydro-1H-1lambda~6~,2-benzothiazol-6-yl)-1H-1,2,3-triazol-4-yl]ethyl beta-L-gulopyranoside(Non-covalent)

6IV.1:

19 residues within 4Å:

Chain A: I.91, Q.92, H.94, H.119, V.121, F.130, G.131, V.134, L.140, V.142, L.197, T.198, T.199, P.201, L.203, V.206, W.208
Ligands: GOL.2, ZN.3

10 PLIP interactions:

10 interactions with chain A

Hydrophobic interactions: A:V.121, A:F.130, A:F.130, A:L.197
Hydrogen bonds: A:Q.92, A:T.198, A:T.199, A:T.199
Water bridges: A:G.131
pi-Stacking: A:H.94

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2:

9 residues within 4Å:

Chain A: N.62, H.64, A.65, N.67, Q.92, H.94, H.96, T.199
Ligands: 6IV.1

4 PLIP interactions:

4 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:Q.92
Water bridges: A:T.199

2 x ZN: ZINC ION(Non-covalent)

ZN.3:	6 residues within 4Å: Chain A: H.94, H.96, E.106, H.119, T.198 Ligands: 6IV.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.94, A:H.96, A:H.119, H₂O.1
ZN.4:	3 residues within 4Å: Chain A: H.3, H.4, W.5 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.3, A:H.4, H₂O.1

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Combs, J.E. et al., Inhibition of Carbonic Anhydrase IX and Monocarboxylate Transporters 1 and 4 in breast cancer via novel inhibition with Beta-Galactose 2C. To Be Published

Release Date

2022-08-24

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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