SMTL ID : 7w54.1

Crystal structure of a bacterial OTU DUB with Ub-PA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.64 Å

Oligo State

hetero-2-4-mer

Ligands

2 x AYE: prop-2-en-1-amine(Covalent)

AYE.1: 9 residues within 4Å: Chain A: G.9, G.11, C.13, G.197, E.236, H.237 Chain C: G.75 Chain D: K.6, G.10 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain A Hydrogen bonds: D:G.10 Hydrophobic interactions: A:H.237 AYE.2: 8 residues within 4Å: Chain B: G.11, A.12, C.13, E.236 Chain E: G.75 Chain F: K.6, G.10, T.12 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:G.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luo, J. et al., Structural basis for the dual catalytic activity of the Legionella pneumophila ovarian tumor (OTU) domain deubiquitinase LotA. J.Biol.Chem. (2022)

Release Date

2022-08-24

Peptides

Lpg2248: AB
Polyubiquitin-B: CDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Lpg2248

Polyubiquitin-B

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