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SMTL ID : 8fau.1

Masking thiol reactivity with thioamide-based MBPs- carbonic anhydrase II complexed with 4-phenylthiazole-2(3H)-thione

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.44 Å

Oligo State

monomer

Ligands

1 x Y3E: 4-phenyl-1,3-thiazole-2(3H)-thione(Non-covalent)

Y3E.1:

12 residues within 4Å:

Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, L.140, V.142, L.197, T.198, T.199
Ligands: ZN.2

5 PLIP interactions:

5 interactions with chain A

Hydrophobic interactions: A:V.121, A:F.130
Water bridges: A:H.94, A:T.199
pi-Cation interactions: A:H.94

1 x ZN: ZINC ION(Non-covalent)

ZN.2:

5 residues within 4Å:

Chain A: H.94, H.96, H.119, T.198
Ligands: Y3E.1

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3:

4 residues within 4Å:

Chain A: K.113, W.244, P.246, A.247

2 PLIP interactions:

2 interactions with chain A

Hydrogen bonds: A:A.247
Salt bridges: A:K.113

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Seo, H. et al., Masking thiol reactivity with thioamide, thiourea, and thiocarbamate-based MBPs. Chem.Commun.(Camb.) (2023)

Release Date

2023-03-01

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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