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SMTL ID : 8ogf.1

Human Carbonic Anhydrase II in complex with 4-(((1-(3-((3aR,7R,7aS)-7-hydroxy-2,2-dimethyltetrahydro-[1,3]dioxolo[4,5-c]pyridin-5(4H)-yl)propyl)-1H-1,2,3-triazol-4-yl)methyl)amino)benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.32 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1:

9 residues within 4Å:

Chain A: N.62, H.64, A.65, N.67, Q.92, H.94, H.96, T.199
Ligands: VMD.3

8 PLIP interactions:

8 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:N.67, A:Q.92
Water bridges: A:H.64, A:T.199, A:T.199, A:T.199

1 x ZN: ZINC ION(Non-covalent)

ZN.2:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: VMD.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

2 x VMD: 4-[[1-[3-[[(2~{R})-2-oxidanyl-2-[(4~{S},5~{R})-2,2,5-trimethyl-1,3-dioxolan-4-yl]ethyl]amino]propyl]-1,2,3-triazol-4-yl]methylamino]benzenesulfonamide(Non-covalent)

VMD.3:	15 residues within 4Å: Chain A: Q.92, H.94, H.96, H.119, V.121, F.130, V.134, V.142, L.197, T.198, T.199, P.201, W.208 Ligands: GOL.1, ZN.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.121, A:L.197, A:L.197 Hydrogen bonds: A:T.198, A:T.198 Water bridges: A:Q.92
VMD.4:	8 residues within 4Å: Chain A: H.4, W.5, H.10, N.11, H.15, W.16, D.19, F.20 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:H.10, A:N.11 Hydrogen bonds: A:D.19, A:D.19, A:D.19 Water bridges: A:W.5, A:N.11, A:N.11, A:N.11

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Angeli, A. et al., Human Carbonic Anhydrase II in complex with 4-(((1-(3-((3aR,7R,7aS)-7-hydroxy-2,2-dimethyltetrahydro-[1,3]dioxolo[4,5-c]pyridin-5(4H)-yl)propyl)-1H-1,2,3-triazol-4-yl)methyl)amino)benzenesulfonamide. To Be Published

Release Date

2024-03-27

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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