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SMTL ID : 8oub.1

The crystal structure of human carbonic anhydrase II with 1-cyclopropyl-6-fluoro-4-oxo-7-(4-((4-sulfamoylbenzyl)carbamoyl)piperazin-1-yl)-1,4-dihydroquinoline-3-carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.18 Å

Oligo State

monomer

Ligands

1 x W1O: 1-cyclopropyl-6-fluoranyl-4-oxidanylidene-7-[4-[(4-sulfamoylphenyl)methylcarbamoyl]piperazin-1-yl]quinoline-3-carboxylic acid

W1O.1:

16 residues within 4Å:

Chain A: W.5, L.60, N.62, H.64, Q.92, H.94, H.96, H.119, V.121, V.142, K.169, L.197, T.198, T.199, W.208
Ligands: ZN.2

10 PLIP interactions:

10 interactions with chain A

Hydrophobic interactions: A:L.60, A:N.62, A:V.121, A:L.197
Hydrogen bonds: A:Q.92, A:K.169, A:T.198, A:T.198
Water bridges: A:N.67
Salt bridges: A:K.169

1 x ZN: ZINC ION(Non-covalent)

ZN.2:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: W1O.1

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Marinacci, B. et al., Inhibition of Pseudomonas aeruginosa Carbonic Anhydrases, Exploring Ciprofloxacin Functionalization Toward New Antibacterial Agents: An In-Depth Multidisciplinary Study. J.Med.Chem. (2024)

Release Date

2024-05-01

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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