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SMTL ID : 8qkz.1

Human Carbonic Anhydrase II in complex with 3,4-dihydro-1H-benzo[c][1,2]oxaborinin-1-ol at pH 9.0

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.34 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL

EDO.1:

4 residues within 4Å:

Chain A: Y.7, D.242, W.244, P.246

1 PLIP interactions:

1 interactions with chain A

Hydrogen bonds: A:Y.7

1 x ZN: ZINC ION

ZN.2:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: KIX.3

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x KIX: 1,1-bis(oxidanyl)-3,4-dihydro-2,1$l^{4}-benzoxaborinine

KIX.3:

8 residues within 4Å:

Chain A: H.94, H.96, H.119, V.121, L.197, T.198, T.199
Ligands: ZN.2

9 PLIP interactions:

9 interactions with chain A

Hydrophobic interactions: A:V.121, A:V.121, A:L.197
Hydrogen bonds: A:T.198, A:T.199, A:T.199, A:T.199
Water bridges: A:N.62, A:N.67

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Angeli, A. et al., Human Carbonic Anhydrase II in complex with 3,4-dihydro-1H-benzo[c][1,2]oxaborinin-1-ol at pH 9.0. To Be Published

Release Date

2024-10-02

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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