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SMTL ID : 8qqa.1

human carbonic anhydrase II in complex with Bithionol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1:

4 residues within 4Å:

Chain A: Y.7, D.242, W.244, P.246

1 PLIP interactions:

1 interactions with chain A

Hydrogen bonds: A:Y.7

1 x ZN: ZINC ION(Non-covalent)

ZN.2:

5 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198

4 PLIP interactions:

3 interactions with chain A, 1 Ligand-Water interactions

Metal complexes: A:H.94, A:H.96, A:H.119, H₂O.3

2 x B1T: 2,2'-sulfanediylbis(4,6-dichlorophenol)(Non-covalent)

B1T.3:	9 residues within 4Å: Chain A: W.5, F.20, H.64, F.130, G.131, V.134, L.197, P.200, P.201 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.130
B1T.4:	4 residues within 4Å: Chain A: P.154, Q.157, K.158, D.161 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.154, A:K.158 pi-Cation interactions: A:K.158

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Paciotti, R. et al., Unprecedented carbonic anhydrase inhibition mechanism: Targeting histidine 64 side chain through a halogen bond. Arch Pharm (2025)

Release Date

2024-10-16

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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