- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x A- A- A- A- U- G- A- C- A: mRNA(Non-covalent)
- 277 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
- 2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
ATP.279: 17 residues within 4Å:- Ligands: NA.281
- Chain r: S.156, L.157, S.158, G.159, G.160, L.334, N.354, G.355, C.356, G.357, K.358, T.359, T.360, Q.389, Q.466, H.495
15 PLIP interactions:15 interactions with chain r- Hydrogen bonds: r:S.158, r:G.159, r:G.160, r:N.354, r:G.355, r:G.355, r:C.356, r:G.357, r:K.358, r:T.359, r:T.360, r:Q.389, r:Q.466
- Salt bridges: r:K.358, r:K.358
ATP.280: 19 residues within 4Å:- Chain V: K.24, P.28
- Ligands: NA.282
- Chain r: F.13, L.18, N.38, G.39, A.40, G.41, K.42, S.43, T.44, Q.73, R.433, A.440, S.442, G.443, G.444, E.445
21 PLIP interactions:21 interactions with chain r- Hydrogen bonds: r:N.38, r:G.39, r:G.39, r:A.40, r:G.41, r:K.42, r:S.43, r:S.43, r:T.44, r:Q.73, r:R.433, r:R.433, r:S.442, r:G.443, r:G.444, r:E.445, r:E.445
- Salt bridges: r:K.42, r:K.42
- pi-Stacking: r:F.13, r:F.13
- 2 x NA: SODIUM ION(Non-functional Binders)
NA.281: 3 residues within 4Å:- Ligands: ATP.279
- Chain r: T.359, Q.389
5 PLIP interactions:5 interactions with chain r- Hydrogen bonds: r:G.159, r:T.359, r:T.359, r:T.359, r:Q.389
NA.282: 5 residues within 4Å:- Ligands: ATP.280
- Chain r: S.43, Q.73, S.442, G.443
4 PLIP interactions:4 interactions with chain r- Hydrogen bonds: r:S.43, r:Q.73, r:Q.73, r:G.443
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hunt, J.F. et al., E.coli Initiation complex with Uup-EQ2. To Be Published
- Release Date
- 2025-04-02
- Peptides
- Large ribosomal subunit protein uL13: A
50S ribosomal protein L14: B
Large ribosomal subunit protein uL15: C
50S ribosomal protein L16: D
Large ribosomal subunit protein bL17: E
Large ribosomal subunit protein uL18: F
50S ribosomal protein L19: G
50S ribosomal protein L2: H
Large ribosomal subunit protein bL20: I
Large ribosomal subunit protein bL21: J
Large ribosomal subunit protein uL22: K
Large ribosomal subunit protein uL23: L
Large ribosomal subunit protein uL24: M
Large ribosomal subunit protein bL25: N
Large ribosomal subunit protein bL27: O
50S ribosomal protein L28: P
Large ribosomal subunit protein uL29: Q
50S ribosomal protein L3: R
50S ribosomal protein L30: S
Large ribosomal subunit protein bL31: T
50S ribosomal protein L32: U
Large ribosomal subunit protein bL33: V
50S ribosomal protein L34: W
Large ribosomal subunit protein bL35: X
50S ribosomal protein L36: Y
Large ribosomal subunit protein uL4: Z
50S ribosomal protein L5: 0
Large ribosomal subunit protein uL6: 1
Large ribosomal subunit protein bL9: 2
Small ribosomal subunit protein uS2: 6
Small ribosomal subunit protein uS3: 7
30S ribosomal protein S4: 8
Small ribosomal subunit protein uS5: 9
30S ribosomal protein S6, non-modified isoform: a
30S ribosomal protein S7: b
30S ribosomal protein S8: c
Small ribosomal subunit protein uS9: d
30S ribosomal protein S10: e
Small ribosomal subunit protein uS11: f
Small ribosomal subunit protein uS12: g
30S ribosomal protein S13: h
Small ribosomal subunit protein uS14: i
Small ribosomal subunit protein uS15: j
Small ribosomal subunit protein bS16: k
Small ribosomal subunit protein uS17: l
30S ribosomal protein S18: m
30S ribosomal protein S19: n
30S ribosomal protein S20: o
Small ribosomal subunit protein bS21: p
Uup: r
Large ribosomal subunit protein uL1: s - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
13B
14C
15D
16E
17F
18G
19H
2I
20J
21K
22L
23M
24N
25O
27P
28Q
29R
3S
30T
31U
32V
33W
34X
35Y
36Z
40
51
62
96
sb7
sc8
sd9
sea
sfb
sgc
shd
sie
sjf
skg
slh
smi
snj
sok
spl
sqm
srn
sso
stp
sur
Us
1
SMTL ID : 9nlj.1
E.coli Initiation complex with Uup-EQ2
Large ribosomal subunit protein uL13
50S ribosomal protein L14
Large ribosomal subunit protein uL15
50S ribosomal protein L16
Large ribosomal subunit protein bL17
Large ribosomal subunit protein uL18
50S ribosomal protein L19
50S ribosomal protein L2
Large ribosomal subunit protein bL20
Large ribosomal subunit protein bL21
Large ribosomal subunit protein uL22
Large ribosomal subunit protein uL23
Large ribosomal subunit protein uL24
Large ribosomal subunit protein bL25
Large ribosomal subunit protein bL27
50S ribosomal protein L28
Large ribosomal subunit protein uL29
50S ribosomal protein L3
50S ribosomal protein L30
Large ribosomal subunit protein bL31
50S ribosomal protein L32
Large ribosomal subunit protein bL33
50S ribosomal protein L34
Large ribosomal subunit protein bL35
50S ribosomal protein L36
Large ribosomal subunit protein uL4
50S ribosomal protein L5
Large ribosomal subunit protein uL6
Large ribosomal subunit protein bL9
Small ribosomal subunit protein uS2
Small ribosomal subunit protein uS3
30S ribosomal protein S4
Small ribosomal subunit protein uS5
30S ribosomal protein S6, non-modified isoform
30S ribosomal protein S7
30S ribosomal protein S8
Small ribosomal subunit protein uS9
30S ribosomal protein S10
Small ribosomal subunit protein uS11
Small ribosomal subunit protein uS12
30S ribosomal protein S13
Small ribosomal subunit protein uS14
Small ribosomal subunit protein uS15
Small ribosomal subunit protein bS16
Small ribosomal subunit protein uS17
30S ribosomal protein S18
30S ribosomal protein S19
30S ribosomal protein S20
Small ribosomal subunit protein bS21
Uup
Large ribosomal subunit protein uL1
Related Entries With Identical Sequence
1b75.1 | 1d6k.1 | 1dfu.1 | 1s03.1 | 1s03.2 | 2j28.1 | 2ykr.1 | 3bbx.1 | 3deg.1 | 3j0d.1 | 3j0e.1 | 3j45.1 | 3j46.1 | 3j5l.1 | 3j5s.1 | 3j7z.1 | 3j8g.1 | 3j9y.1 | 3j9z.1 | 3ja1.1 | 3jbu.1 | 3jbv.1 | 3jcd.1 | 3jce.1 | 3jcj.1 | 3jcn.1 | 487d.1 | 4a2i.1 | 4a5u.1 | 4adv.1 more...less...4csu.1 | 4pe9.1 | 4pea.1 | 4peb.1 | 4pec.1 | 4tol.1 | 4tom.1 | 4ton.1 | 4too.1 | 4tou.1 | 4tov.1 | 4tow.1 | 4tox.1 | 4tp0.1 | 4tp1.1 | 4tp2.1 | 4tp3.1 | 4tp4.1 | 4tp5.1 | 4tp6.1 | 4tp7.1 | 4tp8.1 | 4tp9.1 | 4tpa.1 | 4tpb.1 | 4tpc.1 | 4tpd.1 | 4tpe.1 | 4tpf.1 | 4u1u.1 | 4u1u.2 | 4u1v.1 | 4u1v.2 | 4u20.1 | 4u20.2 | 4u24.1 | 4u24.2 | 4u25.1 | 4u25.2 | 4u26.1 | 4u26.2 | 4u27.1 | 4u27.2 | 4uy8.1 | 4v4h.1 | 4v4h.2 | 4v4q.1 | 4v4q.2 | 4v4v.1 | 4v4w.1 | 4v50.1 | 4v50.2 | 4v52.1 | 4v52.2 | 4v53.1 | 4v53.2 | 4v54.1 | 4v54.2 | 4v55.1 | 4v55.2 | 4v56.1 | 4v56.2 | 4v57.1 | 4v57.2 | 4v5b.1 | 4v5b.2 | 4v5h.1 | 4v5y.1 | 4v5y.2 | 4v64.1 | 4v64.2 | 4v65.1 | 4v66.1 | 4v69.1 | 4v6c.1 | 4v6c.2 | 4v6d.1 | 4v6d.2 | 4v6e.1 | 4v6e.2 | 4v6k.1 | 4v6l.1 | 4v6m.1 | 4v6n.1 | 4v6o.1 | 4v6p.1 | 4v6q.1 | 4v6r.1 | 4v6s.1 | 4v6t.1 | 4v6v.1 | 4v6y.1 | 4v6z.1 | 4v70.1 | 4v71.1 | 4v72.1 | 4v73.1 | 4v74.1 | 4v75.1 | 4v76.1 | 4v77.1 | 4v78.1 | 4v79.1 | 4v7a.1 | 4v7b.1 | 4v7c.1 | 4v7d.1 | 4v7i.1 | 4v7s.1 | 4v7s.2 | 4v7t.1 | 4v7t.2 | 4v7u.1 | 4v7u.2 | 4v7v.1 | 4v7v.2 | 4v85.1 | 4v89.1 | 4v9c.1 | 4v9c.2 | 4v9d.1 | 4v9d.2 | 4v9o.1 | 4v9o.2 | 4v9o.3 | 4v9o.4 | 4v9p.1 | 4v9p.2 | 4v9p.3 | 4v9p.4 | 4wao.1 | 4wap.1 | 4waq.1 | 4waq.2 | 4war.1 | 4wf1.1 | 4wf1.2 | 4woi.1 | 4woi.2 | 4www.1 | 4www.2 | 4ybb.1 | 4ybb.2 | 5ady.1 | 5afi.1 | 5aka.1 | 5gad.1 | 5gae.1 | 5gaf.1 | 5gag.1 | 5gah.1 | 5h5u.1 | 5iqr.1 | 5it8.1 | 5it8.2 | 5j5b.1 | 5j5b.2 | 5j7l.1 | 5j7l.2 | 5j88.1 | 5j88.2 | 5j8a.1 | 5j8a.2 | 5j91.1 | 5j91.2 | 5jc9.1 | 5jc9.2 | 5jte.1 | 5ju8.1 | 5kcr.1 | 5kcs.1 | 5kps.1 | 5kpv.1 | 5kpw.1 | 5kpx.1 | 5l3p.1 | 5lza.1 | 5lzb.1 | 5lzc.1 | 5lzd.1 | 5lze.1 | 5lzf.1 | 5mdv.1 | 5mdw.1 | 5mdy.1 | 5mdz.1 | 5mgp.1 | 5my1.1 | 5nco.1 | 5no2.1 | 5no3.1 | 5no4.1 | 5np6.1 | 5nwy.1 | 5o2r.1 | 5u4i.1 | 5u9f.1 | 5u9g.1 | 5uyk.1 | 5uyl.1 | 5uym.1 | 5uyn.1 | 5uyp.1 | 5uyq.1 | 5uz4.1 | 5wdt.1 | 5we4.1 | 5we6.1 | 5wf0.1 | 5wfk.1 | 5wfs.1 | 6awb.1 | 6awc.1 | 6awd.1 | 6bu8.1 | 6by1.1 | 6by1.2 | 6c4h.1 | 6c4i.1 | 6dnc.1 | 6enf.1 | 6enj.1 | 6enu.1 | 6gbz.1 | 6gc0.1 | 6gc4.1 | 6gc6.1 | 6gc7.1 | 6gc8.1 | 6gwt.1 | 6gxm.1 | 6gxn.1 | 6gxo.1 | 6gxp.1 | 6h4n.1 | 6h58.1 | 6h58.2 | 6h58.3 | 6h58.4 | 6h58.5 | 6h58.6 | 6h58.7 | 6h58.8 | 6h58.9 | 6h58.10 | 6h58.11 | 6h58.12 | 6h58.13 | 6h58.14 | 6h58.16 | 6h58.17 | 6h58.18 | 6h58.19 | 6h58.20 | 6h58.21 | 6h58.22 | 6h58.23 | 6h58.24 | 6h58.25 | 6h58.27 | 6h58.28 | 6h58.29 | 6h58.31 | 6h58.32 | 6h58.33 | 6h58.34 | 6h58.36 | 6h58.37 | 6h58.38 | 6h58.39 | 6h58.40 | 6h58.41 | 6h58.43 | 6h58.44 | 6h58.45 | 6h58.46 | 6h58.47 | 6h58.48 | 6h58.49 | 6h58.53 | 6h58.54 | 6h58.55 | 6h58.56 | 6h58.57 | 6h58.58 | 6h58.59 | 6h58.60 | 6h58.61 | 6h58.62 | 6h58.63 | 6h58.64 | 6h58.65 | 6h58.66 | 6h58.68 | 6h58.69 | 6h58.70 | 6h58.71 | 6h58.72 | 6h58.73 | 6h58.74 | 6h58.75 | 6h58.76 | 6h58.77 | 6h58.79 | 6h58.80 | 6h58.81 | 6h58.83 | 6h58.84 | 6h58.85 | 6h58.86 | 6h58.88 | 6h58.89 | 6h58.90 | 6h58.91 | 6h58.92 | 6h58.93 | 6h58.95 | 6h58.96 | 6h58.97 | 6h58.98 | 6h58.99 | 6h58.100 | 6h58.101 | 6hrm.1 | 6i0y.1 | 6lkq.1 | 6nqb.1 | 6o7k.1 | 6o9j.1 | 6o9k.1 | 6ofx.1 | 6og7.1 | 6ogf.1 | 6ogg.1 | 6ogi.1 | 6om6.1 | 6ore.1 | 6orl.1 | 6osk.1 | 6osq.1 | 6ost.1 | 6ot3.1 | 6ouo.1 | 6pc5.1 | 6pc6.1 | 6pc7.1 | 6pc8.1 | 6pch.1 | 6pcq.1 | 6pcr.1 | 6pcs.1 | 6pct.1 | 6pj6.1 | 6q97.1 | 6q98.1 | 6q9a.1 | 6qdw.1 | 6qul.1 | 6s0k.1 | 6szs.1 | 6tbv.1 | 6tc3.1 | 6u48.1 | 6vwl.1 | 6vwm.1 | 6vwn.1 | 6vyx.1 | 6vyx.2 | 6vyx.5 | 6vyx.29 | 6vyx.33 | 6vyx.35 | 6vyx.40 | 6vyx.42 | 6vyx.43 | 6vyx.47 | 6vyx.48 | 6vyx.49 | 6vyx.51 | 6vyx.52 | 6w6k.1 | 6w77.1 | 6w7m.1 | 6w7n.1 | 6w7w.1 | 6wd0.1 | 6wd1.1 | 6wd2.1 | 6wd3.1 | 6wd4.1 | 6wd5.1 | 6wd6.1 | 6wd7.1 | 6wd8.1 | 6wd9.1 | 6wda.1 | 6wdb.1 | 6wdc.1 | 6wdd.1 | 6wde.1 | 6wdf.1 | 6wdg.1 | 6wdh.1 | 6wdi.1 | 6wdj.1 | 6wdk.1 | 6wdl.1 | 6wdm.1 | 6wnt.1 | 6wnv.1 | 6wnw.1 | 6wyv.1 | 6xe0.1 | 6xz7.1 | 6xza.1 | 6xzb.1 | 6y69.1 | 6ys3.1 | 6ysr.1 | 6yss.1 | 6yst.1 | 6ysu.1 | 6ztl.1 | 6ztm.1 | 6zto.1 | 6ztp.1 | 6zu1.1 | 7abz.1 | 7ac7.1 | 7acj.1 | 7acr.1 | 7afi.1 | 7afl.1 | 7afo.1 | 7b5k.1 | 7bl2.1 | 7bl3.1 | 7bl4.1 | 7bl5.1 | 7bl6.1 | 7bod.1 | 7boe.1 | 7bof.1 | 7bog.1 | 7boh.1 | 7boi.1 | 7bv8.1 | 7cpj.1 | 7d6z.1 | 7d80.1 | 7jss.1 | 7jsw.1 | 7jsz.1 | 7jt1.1 | 7jt2.1 | 7jt3.1 | 7k00.1 | 7k50.1 | 7k51.1 | 7k52.1 | 7k53.1 | 7k54.1 | 7k55.1 | 7lv0.1 | 7lvk.1 | 7m5d.1 | 7n1p.1 | 7n2c.1 | 7n2u.1 | 7n2v.1 | 7n30.1 | 7n31.1 | 7nar.1 | 7nas.1 | 7nat.1 | 7nau.1 | 7nav.1 | 7nax.1 | 7nbu.1 | 7nso.1 | 7nsp.1 | 7nsq.1 | 7nwt.1 | 7nww.1 | 7o19.1 | 7o1a.1 | 7o1c.1 | 7o5h.1 | 7ode.1 | 7oe0.1 | 7oe1.1 | 7oi0.1 | 7oif.1 | 7oig.1 | 7oii.1 | 7oiz.1 | 7oj0.1 | 7ot5.1 | 7otc.1 | 7p3k.1 | 7pjs.1 | 7pjt.1 | 7pju.1 | 7pjv.1 | 7pjw.1 | 7pjx.1 | 7pjy.1 | 7pjz.1 | 7q4k.1 | 7qg8.1 | 7qgh.1 | 7qgn.1 | 7qgr.1 | 7qq3.1 | 7s1g.1 | 7s1h.1 | 7s1i.1 | 7s1j.1 | 7s1k.1 | 7sa4.1 | 7ss9.1 | 7ssd.1 | 7ssl.1 | 7ssn.1 | 7sso.1 | 7ssw.1 | 7st2.1 | 7st6.1 | 7st7.1 | 7tos.1 | 7ug7.1 | 7uph.1 | 7y7c.1 | 7y7d.1 | 7y7e.1 | 7y7f.1 | 7y7g.1 | 7y7h.1 | 7yla.1 | 7z20.1 | 7zod.1 | 7zp8.1 | 7zq5.1 | 7zq6.1 | 7zta.1 | 8a3l.1 | 8akn.1 | 8am9.1 | 8ana.1 | 8ap4.1 | 8aye.1 | 8b0x.1 | 8b7y.1 | 8bf7.1 | 8bge.1 | 8bgh.1 | 8bh4.1 | 8bhj.1 | 8bhl.1 | 8bhn.1 | 8bhp.1 | 8bil.1 | 8bim.1 | 8c8x.1 | 8c8y.1 | 8c8z.1 | 8c90.1 | 8c91.1 | 8c92.1 | 8c93.1 | 8c94.1 | 8c95.1 | 8c96.1 | 8c97.1 | 8c98.1 | 8c99.1 | 8c9a.1 | 8c9b.1 | 8c9c.1 | 8cai.1 | 8cam.1 | 8cep.1 | 8ceu.1 | 8cgd.1 | 8cgj.1 | 8cgk.1 | 8cgr.1 | 8cgu.1 | 8cgv.1 | 8e30.1 | 8e32.1 | 8e33.1 | 8e35.1 | 8e36.1 | 8e3l.1 | 8e3m.1 | 8e3o.1 | 8e41.1 | 8e42.1 | 8e43.1 | 8e44.1 | 8e45.1 | 8e46.1 | 8e47.1 | 8e48.1 | 8e49.1 | 8eiu.1 | 8ekc.1 | 8emm.1 | 8eyq.1 | 8eyt.1 | 8fiz.1 | 8fto.1 | 8fzd.1 | 8fze.1 | 8fzf.1 | 8fzg.1 | 8fzh.1 | 8fzi.1 | 8fzj.1 | 8g2u.1 | 8g31.1 | 8g34.1 | 8g38.1 | 8g6w.1 | 8g6x.1 | 8g6y.1 | 8g7p.1 | 8g7q.1 | 8g7r.1 | 8g7s.1 | 8ghu.1 | 8hsp.1 | 8htz.1 | 8hu1.1 | 8ifb.1 | 8ifc.1 | 8j1z.1 | 8jsg.1 | 8jsh.1 | 8k3o.1 | 8k4e.1 | 8p16.1 | 8p17.1 | 8p18.1 | 8peg.1 | 8phj.1 | 8pkl.1 | 8pva.1 | 8q4f.1 | 8qbt.1 | 8qk7.1 | 8qoa.1 | 8r6c.1 | 8r8m.1 | 8rpy.1 | 8rpz.1 | 8rq0.1 | 8rq2.1 | 8syl.1 | 8t5d.1 | 8t5h.1 | 8vs9.1 | 8vsa.1 | 8w51.1 | 8yuo.1 | 8yup.1 | 8yuq.1 | 8yur.1 | 8yus.1 | 8ztu.1 | 8ztv.1 | 9ax7.1 | 9ax8.1 | 9cg5.1 | 9cg6.1 | 9cg7.1 | 9cl9.1 | 9d89.1 | 9duk.1 | 9dul.1 | 9dyg.1 | 9fbv.1 | 9fco.1 | 9fda.1 | 9fib.1 | 9g06.1 | 9gha.1 | 9ghb.1 | 9ghc.1 | 9ghd.1 | 9ghe.1 | 9ghf.1 | 9gr1.1 | 9gup.1 | 9guq.1 | 9gus.1 | 9gut.1 | 9guu.1 | 9guv.1 | 9guw.1 | 9gux.1 | 9h3k.1 | 9h3l.1 | 9h3m.1 | 9h3n.1 | 9h3o.1 | 9h3p.1 | 9h3q.1 | 9h3r.1 | 9h3s.1 | 9h3t.1 | 9h3u.1 | 9h3v.1 | 9h3w.1 | 9h3x.1 | 9h3y.1 | 9h3z.1 | 9ha1.1 | 9ha2.1 | 9ha3.1 | 9ha4.1 | 9ha5.1 | 9ha6.1 | 9ha7.1 | 9hai.1 | 9hal.1 | 9ham.1 | 9mor.1 | 9mq4.1 | 9n2b.1 | 9n2c.1 | 9njf.1 | 9njv.1 | 9nkl.1 | 9nl5.1 | 9nl6.1 | 9nl7.1 | 9nlb.1 | 9nle.1 | 9nlf.1 | 9nlh.1 | 9nlq.1 | 9nls.1