SMTL ID : 9mq4.1

Damaged 70S ribosome with PrfH bound

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
439 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
2 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Tian, Y. et al., Molecular and structural basis of a subfamily of PrfH rescuing both the damaged and intact ribosomes stalled in translation. Biorxiv (2025)
Release Date
2025-02-05
Peptides
Peptide chain release factor H: G
50S ribosomal protein L2: H
50S ribosomal protein L3: I
Large ribosomal subunit protein uL4: J
Large ribosomal subunit protein uL5: K
Large ribosomal subunit protein uL6: L
Large ribosomal subunit protein bL9: M
50S ribosomal protein L10: N
50S ribosomal protein L11: O
Large ribosomal subunit protein uL13: P
Large ribosomal subunit protein uL14: Q
Large ribosomal subunit protein uL15: R
50S ribosomal protein L16: S
Large ribosomal subunit protein bL17: T
Large ribosomal subunit protein uL18: U
Large ribosomal subunit protein bL19: V
50S ribosomal protein L20: W
Large ribosomal subunit protein bL21: X
Large ribosomal subunit protein uL22: Y
50S ribosomal protein L23: Z
50S ribosomal protein L24: 0
Large ribosomal subunit protein bL25: 1
Large ribosomal subunit protein bL27: 2
50S ribosomal protein L28: 3
Large ribosomal subunit protein uL29: 4
50S ribosomal protein L30: 5
50S ribosomal protein L31: 6
50S ribosomal protein L32: 7
50S ribosomal protein L33: 8
50S ribosomal protein L34: 9
50S ribosomal protein L35: a
50S ribosomal protein L36: b
30S ribosomal protein S2: c
30S ribosomal protein S3: d
30S ribosomal protein S4: e
Small ribosomal subunit protein uS5: f
30S ribosomal protein S6: g
30S ribosomal protein S7: h
Small ribosomal subunit protein uS8: i
Small ribosomal subunit protein uS9: j
Small ribosomal subunit protein uS10: k
30S ribosomal protein S11: l
Small ribosomal subunit protein uS12: m
30S ribosomal protein S13: n
Small ribosomal subunit protein uS14: o
Small ribosomal subunit protein uS15: p
30S ribosomal protein S16: q
Small ribosomal subunit protein uS17: r
30S ribosomal protein S18: s
Small ribosomal subunit protein uS19: t
30S ribosomal protein S20: u
30S ribosomal protein S21: v
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
G
A
H
B
I
C
J
D
K
E
L
F
M
G
N
H
O
I
P
J
Q
K
R
L
S
M
T
N
U
O
V
P
W
Q
X
R
Y
S
Z
T
0
U
1
V
2
W
3
X
4
Y
5
Z
6
a
7
b
8
c
9
d
a
e
b
f
c
g
d
h
e
i
f
j
g
k
h
l
i
m
j
n
k
o
l
p
m
q
n
r
o
s
p
t
q
u
r
v
s
w
t
x
u
y
v
z

Peptide chain release factor H

50S ribosomal protein L2

50S ribosomal protein L3

Large ribosomal subunit protein uL4

Large ribosomal subunit protein uL5

Large ribosomal subunit protein uL6

Large ribosomal subunit protein bL9

50S ribosomal protein L10

50S ribosomal protein L11

Large ribosomal subunit protein uL13

Large ribosomal subunit protein uL14

Large ribosomal subunit protein uL15

50S ribosomal protein L16

Large ribosomal subunit protein bL17

Large ribosomal subunit protein uL18

Large ribosomal subunit protein bL19

50S ribosomal protein L20

Large ribosomal subunit protein bL21

Large ribosomal subunit protein uL22

50S ribosomal protein L23

50S ribosomal protein L24

Large ribosomal subunit protein bL25

Large ribosomal subunit protein bL27

50S ribosomal protein L28

Large ribosomal subunit protein uL29

50S ribosomal protein L30

50S ribosomal protein L31

50S ribosomal protein L32

50S ribosomal protein L33

50S ribosomal protein L34

50S ribosomal protein L35

50S ribosomal protein L36

30S ribosomal protein S2

30S ribosomal protein S3

30S ribosomal protein S4

Small ribosomal subunit protein uS5

30S ribosomal protein S6

30S ribosomal protein S7

Small ribosomal subunit protein uS8

Small ribosomal subunit protein uS9

Small ribosomal subunit protein uS10

30S ribosomal protein S11

Small ribosomal subunit protein uS12

30S ribosomal protein S13

Small ribosomal subunit protein uS14

Small ribosomal subunit protein uS15

30S ribosomal protein S16

Small ribosomal subunit protein uS17

30S ribosomal protein S18

Small ribosomal subunit protein uS19

30S ribosomal protein S20

30S ribosomal protein S21

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