SMTL ID : 9smq.1

Crystal structure of LRH-1/TIF-2 peptide in complex with CP4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-2-mer

Ligands

1 x 01: 3-[5-phenyl-1-[3-(trifluoromethyl)phenyl]pyrazol-3-yl]propanoic acid

01.1: 13 residues within 4Å: Chain A: A.54, W.87, S.88, L.91, I.92, H.95, R.98, V.111, A.136, A.218, E.219, L.222, L.237 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.91, A:L.91, A:I.92, A:I.92, A:A.136, A:A.218 Hydrogen bonds: A:V.111 Salt bridges: A:H.95, A:R.98 pi-Stacking: A:H.95

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 4 residues within 4Å: Chain A: Y.223, H.226, L.227, H.242 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.223, A:Y.223, A:Y.223 Salt bridges: A:H.226, A:H.242 PO4.3: 4 residues within 4Å: Chain A: G.126, Y.221, Y.224, K.225 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.126 Water bridges: A:A.127, A:T.128, A:Y.221, A:Y.224, A:K.225 Salt bridges: A:K.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal structure of LRH-1/TIF-2 peptide in complex with CP4. To Be Published

Release Date

2025-10-15

Peptides

Nuclear receptor subfamily 5 group A member 2: A
Nuclear receptor coactivator 2: BC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
E

Nuclear receptor subfamily 5 group A member 2

Nuclear receptor coactivator 2

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