- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- hetero-2-2-2-2-mer
- Ligands
- 7 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
K.1: 2 residues within 4Å:- Chain A: G.97, G.98
No protein-ligand interaction detected (PLIP)K.11: 2 residues within 4Å:- Chain B: A.109, A.110
No protein-ligand interaction detected (PLIP)K.12: 3 residues within 4Å:- Chain B: C.69, G.70
- Chain C: K.125
No protein-ligand interaction detected (PLIP)K.13: 1 residues within 4Å:- Chain B: G.71
No protein-ligand interaction detected (PLIP)K.14: 1 residues within 4Å:- Chain B: G.81
No protein-ligand interaction detected (PLIP)K.15: 3 residues within 4Å:- Chain B: G.81, A.82
- Chain F: K.32
No protein-ligand interaction detected (PLIP)K.16: 2 residues within 4Å:- Chain B: A.29, A.30
No protein-ligand interaction detected (PLIP)- 15 x MN: MANGANESE (II) ION(Non-functional Binders)
MN.2: 1 residues within 4Å:- Chain A: G.134
No protein-ligand interaction detected (PLIP)MN.3: 1 residues within 4Å:- Chain A: G.121
No protein-ligand interaction detected (PLIP)MN.4: 2 residues within 4Å:- Chain A: G.70, G.71
No protein-ligand interaction detected (PLIP)MN.5: 2 residues within 4Å:- Chain A: G.39, G.40
No protein-ligand interaction detected (PLIP)MN.6: 2 residues within 4Å:- Chain A: G.137, G.138
No protein-ligand interaction detected (PLIP)MN.7: 2 residues within 4Å:- Chain A: A.99, G.100
No protein-ligand interaction detected (PLIP)MN.8: 1 residues within 4Å:- Chain A: A.1
No protein-ligand interaction detected (PLIP)MN.9: 2 residues within 4Å:- Chain A: A.17, G.18
No protein-ligand interaction detected (PLIP)MN.10: 2 residues within 4Å:- Chain A: A.124, G.125
No protein-ligand interaction detected (PLIP)MN.17: 2 residues within 4Å:- Chain B: G.134, G.135
No protein-ligand interaction detected (PLIP)MN.18: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MN.19: 1 residues within 4Å:- Chain B: G.100
No protein-ligand interaction detected (PLIP)MN.20: 2 residues within 4Å:- Chain B: G.39, G.40
No protein-ligand interaction detected (PLIP)MN.21: 1 residues within 4Å:- Chain B: G.121
No protein-ligand interaction detected (PLIP)MN.22: 1 residues within 4Å:- Chain B: A.1
No protein-ligand interaction detected (PLIP)- 2 x CL: CHLORIDE ION(Non-functional Binders)
CL.23: 6 residues within 4Å:- Chain C: G.45, A.46, G.47, A.48
- Chain D: T.91, S.92
Ligand excluded by PLIPCL.24: 6 residues within 4Å:- Chain G: G.45, A.46, G.47, A.48
- Chain H: T.91, S.92
Ligand excluded by PLIP- 1 x CAC: CACODYLATE ION(Non-covalent)
CAC.25: 4 residues within 4Å:- Chain I: E.74, Q.77, D.78
- Chain J: L.23
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Harp, J.M. et al., Asymmetries in the nucleosome core particle at 2.5 A resolution. Acta Crystallogr.,Sect.D (2000)
- Release Date
- 2000-04-17
- Peptides
- PROTEIN (HISTONE H2A): CG
PROTEIN (HISTONE H2B): DH
PROTEIN (HISTONE H3): EI
PROTEIN (HISTONE H4): FJ - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:C
AG
ED
BH
FE
CI
GF
DJ
H
SMTL ID : 1eqz.1
X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE AT 2.5 A RESOLUTION
PROTEIN (HISTONE H2A)
PROTEIN (HISTONE H2B)
PROTEIN (HISTONE H3)
PROTEIN (HISTONE H4)
Related Entries With Identical Sequence
1f66.1 | 1hq3.1 | 1tzy.1 | 1u35.1 | 2aro.1 | 2cv5.1 | 2f8n.1 | 2hio.1 | 3nqu.1 | 3r45.1 | 4hga.1 | 4kgc.1 | 4ld9.1 | 4uuz.1 | 4z2m.1 | 4zux.1 | 4zux.2 | 5c3i.1 | 5c3i.2 | 5c3i.3 | 5c3i.4 | 5c3i.5 | 5c3i.6 | 5e5a.1 | 5kgf.1 | 5o9g.1 | 5omx.1 | 5ong.1 | 5onw.1 | 5x0x.1 more...less...5xf3.1 | 5xf4.1 | 5xf5.1 | 6buz.1 | 6dzt.1 | 6e0c.1 | 6e0p.1 | 6ftx.1 | 6g0l.1 | 6hts.1 | 6i84.1 | 6j99.1 | 6kw3.1 | 6kw4.1 | 6kw5.1 | 6l9z.1 | 6la2.1 | 6la8.1 | 6la9.1 | 6lab.1 | 6ler.1 | 6ler.2 | 6ltj.1 | 6m3v.1 | 6m44.1 | 6m4d.1 | 6m4g.1 | 6m4h.1 | 6ne3.1 | 6nzo.1 | 6o1d.1 | 6o22.1 | 6o96.1 | 6om3.1 | 6om3.2 | 6pa7.1 | 6pwe.1 | 6pwf.1 | 6pwv.1 | 6pww.1 | 6pwx.1 | 6px1.1 | 6px3.1 | 6r0c.1 | 6r8y.1 | 6rny.1 | 6ryr.1 | 6ryu.1 | 6se0.1 | 6se6.1 | 6see.1 | 6sef.1 | 6seg.1 | 6t79.1 | 6t7a.1 | 6t7b.1 | 6t7c.1 | 6t7d.1 | 6tem.1 | 6upk.1 | 6upl.1 | 6v92.1 | 6vz4.1 | 6w5i.1 | 6w5m.1 | 6w5n.1 | 6wkr.1 | 6y5d.1 | 6zhx.1 | 6zhy.1 | 7dbp.1 | 7jo9.1 | 7joa.1 | 7k5x.1 | 7k5y.1 | 7k60.1 | 7k61.1 | 7k63.1 | 7kbd.1 | 7kbe.1 | 7kbf.1 | 7m1x.1 | 7mbm.1 | 7mbn.1 | 7nkx.1 | 7nky.1 | 7nl0.1 | 7otq.1 | 7pet.1 | 7peu.1 | 7pev.1 | 7pew.1 | 7pex.1 | 7pey.1 | 7pez.1 | 7pf0.1 | 7pf2.1 | 7pf3.1 | 7pf4.1 | 7pf5.1 | 7pf6.1 | 7pfa.1 | 7pfc.1 | 7pfd.1 | 7pfe.1 | 7pff.1 | 7pft.1 | 7pfu.1 | 7pfv.1 | 7pfw.1 | 7pfx.1 | 7pii.1 | 7r5r.1 | 7ssa.1 | 7tan.1 | 7u0g.1 | 7u0i.1 | 7u0j.1 | 7u46.1 | 7u47.1 | 7u4d.1 | 7ud5.1 | 7unc.1 | 7und.1 | 7unk.1 | 7ux9.1 | 7v90.1 | 7v96.1 | 7v9c.1 | 7v9j.1 | 7v9k.1 | 7v9s.1 | 7va4.1 | 7vcq.1 | 7vcq.2 | 7vcq.3 | 7vdt.1 | 7vdv.1 | 7vvu.1 | 7vvz.1 | 7x3t.1 | 7x3v.1 | 7x3w.1 | 7x3x.1 | 7xfc.1 | 7xfh.1 | 7xfi.1 | 7xfj.1 | 7xfl.1 | 7xfm.1 | 7xfn.1 | 7xnp.1 | 7y5u.1 | 7y5v.1 | 7y5w.1 | 7y60.1 | 7y61.1 | 7ywx.1 | 7yyh.1 | 7zi4.1 | 8aag.1 | 8b0a.1 | 8bvw.1 | 8byq.1 | 8bz1.1 | 8dk5.1 | 8du4.1 | 8ett.1 | 8evg.1 | 8evh.1 | 8evi.1 | 8evj.1 | 8gpn.1 | 8gxq.12 | 8gxq.79 | 8gxs.12 | 8gxs.81 | 8h1t.1 | 8iqf.1 | 8iqg.1 | 8j6s.1 | 8j6t.1 | 8jh2.1 | 8jh3.1 | 8jh4.1 | 8of4.1 | 8off.1 | 8sps.1 | 8spu.1 | 8svf.1 | 8syp.1 | 8thu.1