- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-2-2-2-2-mer
- Ligands
- 5 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.1: 3 residues within 4Å:- Chain A: R.30, R.33, K.37
7 PLIP interactions:7 interactions with chain A- Water bridges: A:R.33, A:K.37, A:K.37, A:K.37
- Salt bridges: A:R.30, A:R.33, A:K.37
PO4.6: 4 residues within 4Å:- Chain A: I.80, P.81
- Chain B: S.56, K.58
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:S.56, B:K.58
- Water bridges: B:K.58
- Salt bridges: B:K.58
PO4.9: 3 residues within 4Å:- Chain C: R.50, E.51, R.54
2 PLIP interactions:2 interactions with chain C- Water bridges: C:Y.55
- Salt bridges: C:R.54
PO4.16: 3 residues within 4Å:- Chain E: R.30, R.33, K.37
3 PLIP interactions:3 interactions with chain E- Salt bridges: E:R.30, E:R.33, E:K.37
PO4.17: 4 residues within 4Å:- Chain E: R.78
- Chain F: S.56, S.57, K.58
3 PLIP interactions:1 interactions with chain E, 2 interactions with chain F- Salt bridges: E:R.78
- Hydrogen bonds: F:S.57, F:K.58
- 23 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 2 residues within 4Å:- Chain A: R.33, R.36
Ligand excluded by PLIPCL.3: 3 residues within 4Å:- Chain A: A.70, L.86, N.90
Ligand excluded by PLIPCL.4: 2 residues within 4Å:- Chain A: N.111, I.112
Ligand excluded by PLIPCL.5: 2 residues within 4Å:- Chain A: R.30, R.33
Ligand excluded by PLIPCL.7: 6 residues within 4Å:- Chain A: G.45, A.46, G.47, A.48
- Chain B: T.91, S.92
Ligand excluded by PLIPCL.8: 3 residues within 4Å:- Chain B: K.35, S.65
- Chain H: G.102
Ligand excluded by PLIPCL.10: 3 residues within 4Å:- Chain C: M.121, P.122, K.123
Ligand excluded by PLIPCL.11: 3 residues within 4Å:- Chain C: R.117, V.118, T.119
Ligand excluded by PLIPCL.12: 2 residues within 4Å:- Chain C: Q.126, R.129
Ligand excluded by PLIPCL.13: 3 residues within 4Å:- Chain D: R.40, R.46, I.47
Ligand excluded by PLIPCL.14: 3 residues within 4Å:- Chain C: R.64
- Chain D: T.31, P.33
Ligand excluded by PLIPCL.15: 3 residues within 4Å:- Chain C: A.96
- Chain D: R.96
- Chain E: T.102
Ligand excluded by PLIPCL.18: 6 residues within 4Å:- Chain E: G.45, A.46, G.47, A.48
- Chain F: T.91, S.92
Ligand excluded by PLIPCL.19: 4 residues within 4Å:- Chain E: R.18, S.19, V.28, G.29
Ligand excluded by PLIPCL.20: 1 residues within 4Å:- Chain F: K.117
Ligand excluded by PLIPCL.21: 3 residues within 4Å:- Chain D: G.102
- Chain F: K.35, S.65
Ligand excluded by PLIPCL.22: 4 residues within 4Å:- Chain A: Q.105
- Chain G: E.60, L.61, K.65
Ligand excluded by PLIPCL.23: 3 residues within 4Å:- Chain G: M.121, P.122, K.123
Ligand excluded by PLIPCL.24: 3 residues within 4Å:- Chain G: R.117, V.118, T.119
Ligand excluded by PLIPCL.25: 3 residues within 4Å:- Chain G: Q.69, R.70, R.73
Ligand excluded by PLIPCL.26: 3 residues within 4Å:- Chain A: T.102
- Chain G: A.96
- Chain H: R.96
Ligand excluded by PLIPCL.27: 4 residues within 4Å:- Chain H: R.36, R.40, R.46, I.47
Ligand excluded by PLIPCL.28: 3 residues within 4Å:- Chain H: T.31, K.32, R.56
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wood, C.M. et al., High-resolution structure of the native histone octamer. Acta Crystallogr.,Sect.F (2005)
- Release Date
- 2004-08-03
- Peptides
- Histone H2A-IV: AE
Histone H2B: BF
HISTONE H3: CG
HISTONE H4-VI: DH - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AE
EB
BF
FC
CG
GD
DH
H
SMTL ID : 1tzy.1
Crystal Structure of the Core-Histone Octamer to 1.90 Angstrom Resolution
Histone H2A-IV
Histone H2B
HISTONE H3
HISTONE H4-VI
Related Entries With Identical Sequence
1eqz.1 | 1f66.1 | 1hq3.1 | 1u35.1 | 2aro.1 | 2cv5.1 | 2f8n.1 | 2hio.1 | 3nqu.1 | 3r45.1 | 4hga.1 | 4kgc.1 | 4ld9.1 | 4uuz.1 | 4z2m.1 | 4zux.1 | 4zux.2 | 5c3i.1 | 5c3i.2 | 5c3i.3 | 5c3i.4 | 5c3i.5 | 5c3i.6 | 5e5a.1 | 5kgf.1 | 5o9g.1 | 5omx.1 | 5ong.1 | 5onw.1 | 5x0x.1 more...less...5xf3.1 | 5xf4.1 | 5xf5.1 | 6buz.1 | 6dzt.1 | 6e0c.1 | 6e0p.1 | 6ftx.1 | 6g0l.1 | 6hts.1 | 6i84.1 | 6j99.1 | 6kw3.1 | 6kw4.1 | 6kw5.1 | 6l9z.1 | 6la2.1 | 6la8.1 | 6la9.1 | 6lab.1 | 6ler.1 | 6ler.2 | 6ltj.1 | 6m3v.1 | 6m44.1 | 6m4d.1 | 6m4g.1 | 6m4h.1 | 6ne3.1 | 6nzo.1 | 6o1d.1 | 6o22.1 | 6o96.1 | 6om3.1 | 6om3.2 | 6pa7.1 | 6pwe.1 | 6pwf.1 | 6pwv.1 | 6pww.1 | 6pwx.1 | 6px1.1 | 6px3.1 | 6r0c.1 | 6r8y.1 | 6rny.1 | 6ryr.1 | 6ryu.1 | 6se0.1 | 6se6.1 | 6see.1 | 6sef.1 | 6seg.1 | 6t79.1 | 6t7a.1 | 6t7b.1 | 6t7c.1 | 6t7d.1 | 6tem.1 | 6upk.1 | 6upl.1 | 6v92.1 | 6vz4.1 | 6w5i.1 | 6w5m.1 | 6w5n.1 | 6wkr.1 | 6y5d.1 | 6zhx.1 | 6zhy.1 | 7dbp.1 | 7jo9.1 | 7joa.1 | 7k5x.1 | 7k5y.1 | 7k60.1 | 7k61.1 | 7k63.1 | 7kbd.1 | 7kbe.1 | 7kbf.1 | 7m1x.1 | 7mbm.1 | 7mbn.1 | 7nkx.1 | 7nky.1 | 7nl0.1 | 7otq.1 | 7pet.1 | 7peu.1 | 7pev.1 | 7pew.1 | 7pex.1 | 7pey.1 | 7pez.1 | 7pf0.1 | 7pf2.1 | 7pf3.1 | 7pf4.1 | 7pf5.1 | 7pf6.1 | 7pfa.1 | 7pfc.1 | 7pfd.1 | 7pfe.1 | 7pff.1 | 7pft.1 | 7pfu.1 | 7pfv.1 | 7pfw.1 | 7pfx.1 | 7pii.1 | 7r5r.1 | 7ssa.1 | 7tan.1 | 7u0g.1 | 7u0i.1 | 7u0j.1 | 7u46.1 | 7u47.1 | 7u4d.1 | 7ud5.1 | 7unc.1 | 7und.1 | 7unk.1 | 7ux9.1 | 7v90.1 | 7v96.1 | 7v9c.1 | 7v9j.1 | 7v9k.1 | 7v9s.1 | 7va4.1 | 7vcq.1 | 7vcq.2 | 7vcq.3 | 7vdt.1 | 7vdv.1 | 7vvu.1 | 7vvz.1 | 7x3t.1 | 7x3v.1 | 7x3w.1 | 7x3x.1 | 7xfc.1 | 7xfh.1 | 7xfi.1 | 7xfj.1 | 7xfl.1 | 7xfm.1 | 7xfn.1 | 7xnp.1 | 7y5u.1 | 7y5v.1 | 7y5w.1 | 7y60.1 | 7y61.1 | 7ywx.1 | 7yyh.1 | 7zi4.1 | 8aag.1 | 8b0a.1 | 8bvw.1 | 8byq.1 | 8bz1.1 | 8dk5.1 | 8du4.1 | 8ett.1 | 8etv.1 | 8eu2.1 | 8eue.1 | 8euj.1 | 8evg.1 | 8evh.1 | 8evi.1 | 8evj.1 | 8g6g.1 | 8g6h.1 | 8g6q.1 | 8g6s.1 | 8gpn.1 | 8gxq.12 | 8gxq.79 | 8gxs.12 | 8gxs.81 | 8h1t.1 | 8iqf.1 | 8iqg.1 | 8j6s.1 | 8j6t.1 | 8jh2.1 | 8jh3.1 | 8jh4.1 | 8of4.1 | 8off.1 | 8pki.1 | 8pkj.1 | 8rbx.1 | 8sps.1 | 8spu.1 | 8svf.1 | 8syp.1 | 8thu.1 | 8tof.1 | 8x15.1 | 8x19.1 | 8x1c.1 | 8yjf.1 | 8yjm.1 | 8yti.1