SMTL ID : 2clv.1 (1 other biounit)

MHC Class I Natural Mutant H-2Kbm8 Heavy Chain Complexed With beta-2 Microglobulin and pBM8 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SER- GLN- TYR- TYR- TYR- ASN- SER- LEU: RBM5 PROTEIN(Non-covalent)

SER-GLN-TYR-TYR-TYR-ASN-SER-LEU.1: 26 residues within 4Å: Chain A: Y.7, V.9, Y.45, E.63, K.66, A.67, G.69, N.70, F.74, D.77, T.80, Y.84, I.95, V.97, S.99, Q.114, Y.116, T.143, K.146, W.147, E.152, R.155, L.156, Y.159, W.167, Y.171 37 PLIP interactions: 37 interactions with chain A Hydrophobic interactions: A:V.9, A:F.74, A:I.95, A:V.97, A:Y.116, A:T.143, A:W.147, A:Y.159, A:Y.159, A:Y.159 Hydrogen bonds: A:Y.7, A:Y.45, A:Y.45, A:E.63, A:K.66, A:N.70, A:N.70, A:D.77, A:D.77, A:D.77, A:Y.84, A:S.99, A:S.99, A:E.152, A:R.155, A:R.155, A:Y.159, A:Y.159, A:W.167, A:Y.171, A:Y.171 Water bridges: A:S.73, A:S.73, A:S.73, A:Y.116, A:E.152 Salt bridges: A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Auphan-Anezin, N. et al., Distinct orientation of the alloreactive monoclonal CD8 T cell activation program by three different peptide/MHC complexes. Eur. J. Immunol. (2006)

Release Date

2006-06-14

Peptides

H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN: A
BETA-2 MICROGLOBULIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN

BETA-2 MICROGLOBULIN

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