SMTL ID : 2clz.1 (1 other biounit)

Mhc Class I Natural Mutant H-2Kbm8 Heavy Chain Complexed With beta-2 Microglobulin and pBM1 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ILE- ASN- PHE- ASP- PHE- ASN- THR- ILE: RBM5 PROTEIN(Non-covalent)

ILE-ASN-PHE-ASP-PHE-ASN-THR-ILE.1: 28 residues within 4Å: Chain A: L.5, Y.7, V.9, Y.59, E.63, K.66, N.70, S.73, F.74, V.76, D.77, T.80, L.81, Y.84, V.97, S.99, Q.114, Y.116, T.143, K.146, W.147, E.152, R.155, L.156, Y.159, T.163, W.167, Y.171 50 PLIP interactions: 50 interactions with chain A Hydrophobic interactions: A:Y.7, A:V.9, A:Y.59, A:N.70, A:F.74, A:V.76, A:D.77, A:T.80, A:L.81, A:Y.84, A:V.97, A:Y.116, A:T.143, A:W.147, A:L.156, A:Y.159, A:Y.159, A:Y.159, A:T.163, A:W.167 Hydrogen bonds: A:Y.7, A:S.24, A:S.24, A:K.66, A:N.70, A:N.70, A:S.73, A:D.77, A:Y.84, A:S.99, A:K.146, A:K.146, A:E.152, A:R.155, A:R.155, A:Y.159, A:Y.171, A:Y.171 Water bridges: A:Y.7, A:E.63, A:Q.65, A:N.70, A:D.77, A:S.99, A:Y.116, A:Y.116, A:E.152, A:Y.159 Salt bridges: A:K.66, A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Auphan-Anezin, N. et al., Distinct Orientation of the Alloreactive Monoclonal Cd8 T Cell Activation Program by Three Different Peptide/Mhc Complexes. Eur.J.Immunol. (2006)

Release Date

2006-06-14

Peptides

H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN: A
BETA-2 MICROGLOBULIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN

BETA-2 MICROGLOBULIN

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