SMTL ID : 3veu.1

Crystal Structure of Human Beta Secretase in Complex with NVP-AVI326

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.52 Å

Oligo State

monomer

Ligands

1 x 0GO: (2S)-N-[(2S,3R)-3-HYDROXY-1-PHENYL-4-{[3-(PROPAN-2-YL)BENZYL]AMINO}BUTAN-2-YL]-2-[(5S)-6-OXO-1-PROPYL-1,7-DIAZASPIRO[4.4]NON-7-YL]PROPANAMIDE(Non-covalent)

0GO.1: 22 residues within 4Å: Chain A: G.27, Q.28, G.29, L.46, D.48, G.50, S.51, V.85, P.86, Y.87, T.88, Q.89, F.124, I.126, W.131, I.134, I.142, Y.214, D.244, G.246, T.247, T.248 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.46, A:V.85, A:Y.87, A:T.88, A:F.124, A:W.131, A:I.134, A:I.142, A:Y.214 Hydrogen bonds: A:D.48, A:T.88, A:Q.89, A:D.244, A:G.246, A:T.248 Water bridges: A:T.247, A:N.249 pi-Stacking: A:Y.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rueeger, H. et al., Discovery of cyclic sulfone hydroxyethylamines as potent and selective beta-site APP-cleaving enzyme 1 (BACE1) inhibitors: structure based design and in vivo reduction of amyloid beta-peptides. J.Med.Chem. (2012)

Release Date

2012-11-21

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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