SMTL ID : 3vf3.1

Crystal Structure of Human Beta Secretase in Complex with NVP-BQQ711

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

1 x 0GS: (3S,4S,5R)-3-(4-amino-3-bromo-5-fluorobenzyl)-5-{[3-(1,1-difluoroethyl)benzyl]amino}tetrahydro-2H-thiopyran-4-ol 1,1-dioxide(Non-covalent)

0GS.1: 22 residues within 4Å: Chain A: Q.28, L.46, D.48, G.50, S.51, V.85, P.86, Y.87, T.88, Q.89, G.90, K.123, F.124, I.126, W.131, I.134, I.142, R.144, Y.214, D.244, G.246, T.247 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.46, A:Y.87, A:I.134, A:Y.214 Hydrogen bonds: A:D.48, A:F.124, A:D.244 Water bridges: A:T.247 pi-Stacking: A:Y.87 Halogen bonds: A:Q.28, A:K.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rueeger, H. et al., Discovery of cyclic sulfone hydroxyethylamines as potent and selective beta-site APP-cleaving enzyme 1 (BACE1) inhibitors: structure based design and in vivo reduction of amyloid beta-peptides. J.Med.Chem. (2012)

Release Date

2012-11-21

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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