SMTL ID : 7kch.1

Myosin XI-F-actin complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-1-mer

Ligands

3 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 15 residues within 4Å: Chain A: D.13, G.15, K.20, Q.139, G.158, D.159, K.215, E.216, G.303, G.304, T.305, M.307, Y.308, K.338 Ligands: MG.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.139, A:D.159, A:K.215, A:E.216, A:G.304 Salt bridges: A:K.20, A:K.20 ADP.3: 15 residues within 4Å: Chain C: D.13, G.15, K.20, Q.139, G.158, D.159, K.215, E.216, G.303, G.304, T.305, M.307, Y.308, K.338 Ligands: MG.4 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:Q.139, C:D.159, C:K.215, C:E.216, C:G.304 Salt bridges: C:K.20, C:K.20 ADP.5: 15 residues within 4Å: Chain D: D.13, G.15, K.20, Q.139, G.158, D.159, K.215, E.216, G.303, G.304, T.305, M.307, Y.308, K.338 Ligands: MG.6 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:Q.139, D:D.159, D:K.215, D:E.216, D:G.304 Salt bridges: D:K.20, D:K.20

3 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 7 residues within 4Å: Chain A: D.13, N.14, G.15, G.17, L.18, K.20 Ligands: ADP.1 No protein-ligand interaction detected (PLIP) MG.4: 7 residues within 4Å: Chain C: D.13, N.14, G.15, G.17, L.18, K.20 Ligands: ADP.3 No protein-ligand interaction detected (PLIP) MG.6: 7 residues within 4Å: Chain D: D.13, N.14, G.15, G.17, L.18, K.20 Ligands: ADP.5 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruijgrok, P.V. et al., Optical control of fast and processive engineered myosins in vitro and in living cells. Nat.Chem.Biol. (2021)

Release Date

2021-01-13

Peptides

Actin, alpha skeletal muscle: ACD
Unconventional myosin heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

C
B

D
C

B
A

Actin, alpha skeletal muscle

Unconventional myosin heavy chain

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