- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-pentamer
- Ligands
- 5 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.1: 16 residues within 4Å:- Chain A: G.15, S.16, G.17, L.18, K.20, G.158, D.159, R.212, K.215, E.216, G.304, T.305, M.307, Y.308, K.338
- Ligands: MG.2
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:G.17, A:L.18, A:D.159, A:D.159, A:K.215, A:E.216, A:G.304, A:K.338
- Salt bridges: A:K.20, A:K.20
- pi-Stacking: A:Y.308
ADP.3: 16 residues within 4Å:- Chain B: G.15, S.16, G.17, L.18, K.20, G.158, D.159, R.212, K.215, E.216, G.304, T.305, M.307, Y.308, K.338
- Ligands: MG.4
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:G.17, B:L.18, B:D.159, B:D.159, B:K.215, B:E.216, B:G.304, B:K.338
- Salt bridges: B:K.20, B:K.20
- pi-Stacking: B:Y.308
ADP.5: 16 residues within 4Å:- Chain C: G.15, S.16, G.17, L.18, K.20, G.158, D.159, R.212, K.215, E.216, G.304, T.305, M.307, Y.308, K.338
- Ligands: MG.6
11 PLIP interactions:11 interactions with chain C- Hydrogen bonds: C:G.17, C:L.18, C:D.159, C:D.159, C:K.215, C:E.216, C:G.304, C:K.338
- Salt bridges: C:K.20, C:K.20
- pi-Stacking: C:Y.308
ADP.7: 16 residues within 4Å:- Chain D: G.15, S.16, G.17, L.18, K.20, G.158, D.159, R.212, K.215, E.216, G.304, T.305, M.307, Y.308, K.338
- Ligands: MG.8
11 PLIP interactions:11 interactions with chain D- Hydrogen bonds: D:G.17, D:L.18, D:D.159, D:D.159, D:K.215, D:E.216, D:G.304, D:K.338
- Salt bridges: D:K.20, D:K.20
- pi-Stacking: D:Y.308
ADP.9: 16 residues within 4Å:- Chain E: G.15, S.16, G.17, L.18, K.20, G.158, D.159, R.212, K.215, E.216, G.304, T.305, M.307, Y.308, K.338
- Ligands: MG.10
11 PLIP interactions:11 interactions with chain E- Hydrogen bonds: E:G.17, E:L.18, E:D.159, E:D.159, E:K.215, E:E.216, E:G.304, E:K.338
- Salt bridges: E:K.20, E:K.20
- pi-Stacking: E:Y.308
- 5 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: Q.139, D.156
- Ligands: ADP.1
No protein-ligand interaction detected (PLIP)MG.4: 3 residues within 4Å:- Chain B: Q.139, D.156
- Ligands: ADP.3
No protein-ligand interaction detected (PLIP)MG.6: 3 residues within 4Å:- Chain C: Q.139, D.156
- Ligands: ADP.5
No protein-ligand interaction detected (PLIP)MG.8: 3 residues within 4Å:- Chain D: Q.139, D.156
- Ligands: ADP.7
No protein-ligand interaction detected (PLIP)MG.10: 3 residues within 4Å:- Chain E: Q.139, D.156
- Ligands: ADP.9
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Carman, P.J. et al., Structures of the free and capped ends of the actin filament. Science (2023)
- Release Date
- 2023-06-07
- Peptides
- Actin, alpha skeletal muscle: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
E
SMTL ID : 8f8p.1
Cryo-EM structure of F-actin in the ADP state
Actin, alpha skeletal muscle
Toggle Identical (ABCDE)Related Entries With Identical Sequence
1eqy.1 | 1esv.1 | 1ijj.1 | 1ijj.2 | 1mdu.1 | 1mdu.2 | 1p8z.1 | 1p8z.2 | 1rgi.1 | 1sqk.1 | 2pbd.1 | 2v51.1 | 2v52.1 | 2vyp.1 | 2vyp.2 | 2yje.1 | 2yjf.1 | 2yjf.2 | 2yjf.3 | 3b5u.1 | 3cjb.1 | 3cjc.1 | 3daw.1 | 3ffk.1 | 3ffk.2 | 3j8i.1 | 3j8j.1 | 3j8k.1 | 3tu5.1 | 4eah.1 more...less...4eah.2 | 4pkg.1 | 4pkh.1 | 4pkh.2 | 4pkh.3 | 4pkh.4 | 4pki.1 | 4wyb.1 | 4wyb.2 | 4wyb.3 | 4wyb.4 | 4wyb.5 | 4wyb.6 | 4wyb.7 | 4wyb.8 | 4wyb.9 | 4wyb.10 | 4wyb.11 | 4wyb.12 | 4z94.1 | 5ubo.1 | 5yee.1 | 6av9.1 | 6avb.1 | 6bih.1 | 6bih.2 | 6gvc.1 | 6gvc.2 | 6gvc.3 | 6gvc.4 | 6jbk.1 | 6jbk.2 | 6jbk.3 | 6jbk.4 | 6jcu.1 | 6jcu.2 | 6jh9.1 | 6m5g.1 | 6mgo.1 | 6qri.1 | 6qri.2 | 6u96.1 | 6uby.1 | 6uc0.1 | 6uc4.1 | 6vao.1 | 6vau.1 | 6vec.1 | 6w17.1 | 6w7v.1 | 6wvt.1 | 6x5z.1 | 7ad9.1 | 7ahn.1 | 7ahq.1 | 7aqk.1 | 7bt7.1 | 7bte.1 | 7bti.1 | 7c2g.1 | 7c2h.1 | 7ccc.1 | 7kch.1 | 7p1g.1 | 7plt.1 | 7plu.1 | 7plv.1 | 7plw.1 | 7plx.1 | 7ply.1 | 7plz.1 | 7pm0.1 | 7pm1.1 | 7pm2.1 | 7pm3.1 | 7pm5.1 | 7pm6.1 | 7pm7.1 | 7pm8.1 | 7pm9.1 | 7pma.1 | 7pmb.1 | 7pmc.1 | 7pmd.1 | 7pme.1 | 7pmf.1 | 7pmg.1 | 7pmh.1 | 7pmi.1 | 7pmj.1 | 7pml.1 | 7qim.1 | 7r94.1 | 7sx8.1 | 7sx9.1 | 7sxa.1 | 7tpt.1 | 7uti.1 | 7utj.1 | 7utl.1 | 7uuw.1 | 7uxf.1 | 7w4z.1 | 7w50.1 | 7w51.1 | 7w52.1 | 7w52.2 | 7w52.3 | 7w52.4 | 7whf.1 | 7whf.2 | 7whg.1 | 7yne.1 | 7yne.2 | 7yne.3 | 7yne.4 | 7z7h.1 | 7z7i.1 | 8c4c.1 | 8c4e.1 | 8d13.1 | 8d14.1 | 8d15.1 | 8d17.1 | 8d18.1 | 8f8q.1 | 8f8r.1 | 8f8s.1 | 8f8t.1 | 8jo3.1 | 8jo4.1 | 8pvx.1 | 8uxw.1 | 8uxx.1