SMTL ID : 2vyp.2 (1 other biounit)

Rabbit-muscle G-actin in complex with myxobacterial rhizopodin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)

CA.1: 3 residues within 4Å: Chain A: Q.356, W.358, E.363 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:Q.356, A:W.358, A:E.363, A:E.363 CA.3: 1 residues within 4Å: Ligands: ATP.2 No protein-ligand interaction detected (PLIP) CA.4: 2 residues within 4Å: Chain A: D.288, D.290 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.288, A:D.288, A:D.290

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 19 residues within 4Å: Chain A: G.15, S.16, G.17, L.18, K.20, G.158, D.159, G.160, V.161, G.184, R.185, K.215, E.216, G.303, G.304, T.305, M.307, Y.308 Ligands: CA.3 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:S.16, A:S.16, A:G.17, A:L.18, A:L.18, A:G.158, A:D.159, A:D.159, A:G.160, A:V.161, A:V.161, A:K.215, A:E.216, A:G.304 Salt bridges: A:K.20, A:K.20 pi-Stacking: A:Y.308

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hagelueken, G. et al., The Absolute Configuration of Rhizopodin and its Inhibition of Actin Polymerization by Dimerization. Angew.Chem.Int.Ed.Engl. (2009)

Release Date

2009-02-24

Peptides

ACTIN, ALPHA SKELETAL MUSCLE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

ACTIN, ALPHA SKELETAL MUSCLE

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