SMTL ID : 7vvu.1

NuA4 HAT module bound to the nucleosome

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-2-2-2-2-2-1-mer

Ligands

1 x CMC: CARBOXYMETHYL COENZYME *A(Covalent)

CMC.1: 21 residues within 4Å: Chain I: K.17 Chain L: F.258, L.259, A.303, C.304, I.305, L.306, T.307, Q.312, R.313, M.314, G.315, Y.316, G.317, K.318, E.338, P.340, L.344, L.347, A.351, R.421 14 PLIP interactions: 14 interactions with chain L Hydrophobic interactions: L:L.259, L:L.344 Hydrogen bonds: L:T.307, L:T.307, L:T.307, L:Y.311, L:Q.312, L:R.313, L:M.314, L:G.315, L:Y.316, L:G.317, L:K.318 Salt bridges: L:R.421

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qu, K. et al., Structure of the NuA4 acetyltransferase complex bound to the nucleosome. Nature (2022)

Release Date

2022-08-10

Peptides

Chromatin modification-related protein EAF6: A
Chromatin modification-related protein YNG2: B
Enhancer of polycomb-like protein 1: CO
Histone H3: DH
H4: EI
Histone H2A: FJ
Histone H2B 1.1: GK
Histone acetyltransferase ESA1: L

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
Y

B
V

C
T

O
X

D
O

H
A

E
Q

I
B

F
S

J
N

G
U

K
D

L
P

Chromatin modification-related protein EAF6

Chromatin modification-related protein YNG2

Enhancer of polycomb-like protein 1

Histone H3

H4

Histone H2A

Histone H2B 1.1

Histone acetyltransferase ESA1

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