SMTL ID : 8of4.1

Nucleosome Bound human SIRT6 (Composite)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-2-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain K: C.141, C.144, C.166, C.177 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:C.141, K:C.144, K:C.166, K:C.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smirnova, E. et al., Binding to nucleosome poises human SIRT6 for histone H3 deacetylation. Elife (2024)

Release Date

2023-08-09

Peptides

Histone H3.2: AE
Histone H4: BF
Histone H2A type 1: CG
Histone H2B: DH
NAD-dependent protein deacylase sirtuin-6: K

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
E

B
B

F
F

C
C

G
G

D
D

H
H

K
L

Histone H3.2

Histone H4

Histone H2A type 1

Histone H2B

NAD-dependent protein deacylase sirtuin-6

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