SMTL ID : 8t3w.1

Structure of Bre1-nucleosome complex - state2

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-2-2-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain K: C.73, H.75, C.93, T.95, C.96 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:C.73, K:H.75, K:C.93, K:C.96 ZN.2: 4 residues within 4Å: Chain K: C.58, C.61, C.78, C.81 4 PLIP interactions: 4 interactions with chain K Metal complexes: K:C.58, K:C.61, K:C.78, K:C.81 ZN.3: 5 residues within 4Å: Chain L: C.73, H.75, C.93, T.95, C.96 5 PLIP interactions: 5 interactions with chain L Metal complexes: L:C.73, L:H.75, L:C.93, L:T.95, L:C.96 ZN.4: 4 residues within 4Å: Chain L: C.58, C.61, C.78, C.81 4 PLIP interactions: 4 interactions with chain L Metal complexes: L:C.58, L:C.61, L:C.78, L:C.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, F. et al., Mechanism of histone H2B monoubiquitination by Bre1. Nat.Struct.Mol.Biol. (2023)

Release Date

2023-10-18

Peptides

Histone H3.2: AE
Histone H4: BF
Histone H2A type 1: CG
Histone H2B: DH
E3 ubiquitin-protein ligase BRE1: KL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
E

B
B

F
F

C
C

G
G

D
D

H
H

K
K

L
L

Histone H3.2

Histone H4

Histone H2A type 1

Histone H2B

E3 ubiquitin-protein ligase BRE1

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