SMTL ID : 1fo0.1

MURINE ALLOREACTIVE SCFV TCR-PEPTIDE-MHC CLASS I MOLECULE COMPLEX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x ILE- ASN- PHE- ASP- PHE- ASN- THR- ILE: NATURALLY PROCESSED OCTAPEPTIDE PBM1(Non-covalent)

ILE-ASN-PHE-ASP-PHE-ASN-THR-ILE.1: 31 residues within 4Å: Chain A: Y.8, V.10, E.25, Y.60, E.64, K.67, N.71, S.74, F.75, D.78, T.81, L.82, Y.85, V.98, S.100, Q.115, Y.117, T.144, K.147, W.148, E.153, R.156, L.157, Y.160, T.164, W.168, Y.172 Chain D: D.96, R.97, V.98, N.100 45 PLIP interactions: 6 interactions with chain D, 39 interactions with chain A Hydrogen bonds: D:D.96, D:R.97, D:R.97, D:V.98, D:N.100, A:E.25, A:K.67, A:N.71, A:N.71, A:S.74, A:D.78, A:Y.85, A:K.147, A:K.147, A:E.153, A:E.153, A:R.156, A:R.156, A:Y.172 Water bridges: D:R.97, A:Y.8, A:Y.46, A:E.64, A:Y.117, A:E.153, A:Y.160, A:Y.160, A:Y.172 Hydrophobic interactions: A:Y.8, A:Y.60, A:F.75, A:D.78, A:L.82, A:V.98, A:T.144, A:W.148, A:L.157, A:Y.160, A:Y.160, A:Y.160, A:T.164, A:W.168, A:W.168 Salt bridges: A:K.67, A:K.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reiser, J.B. et al., Crystal structure of a T cell receptor bound to an allogeneic MHC molecule. Nat.Immunol. (2000)

Release Date

2000-10-02

Peptides

PROTEIN (ALLOGENEIC H-2KB MHC CLASS I MOLECULE): A
PROTEIN (BETA-2 MICROGLOBULIN): B
PROTEIN (BM3.3 T CELL RECEPTOR ALPHA-CHAIN): C
PROTEIN (BM3.3 T CELL RECEPTOR BETA-CHAIN): D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
A

D
B

PROTEIN (ALLOGENEIC H-2KB MHC CLASS I MOLECULE)

PROTEIN (BETA-2 MICROGLOBULIN)

PROTEIN (BM3.3 T CELL RECEPTOR ALPHA-CHAIN)

PROTEIN (BM3.3 T CELL RECEPTOR BETA-CHAIN)

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