SMTL ID : 1osz.1

MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND AN (L4V) MUTANT OF THE VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ARG- GLY- TYR- LEU- TYR- GLN- GLY- LEU: VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN(Non-covalent)

ARG-GLY-TYR-LEU-TYR-GLN-GLY-LEU.1: 26 residues within 4Å: Chain A: Y.7, V.9, Y.59, R.62, E.63, K.66, N.70, S.73, F.74, D.77, Y.84, V.97, S.99, Q.114, Y.116, Y.123, T.143, K.146, W.147, E.152, R.155, L.156, Y.159, T.163, W.167, Y.171 33 PLIP interactions: 33 interactions with chain A Hydrophobic interactions: A:V.9, A:K.66, A:F.74, A:V.97, A:Y.116, A:Y.123, A:T.143, A:W.147, A:Y.159, A:Y.159, A:Y.159, A:T.163, A:W.167 Hydrogen bonds: A:Y.7, A:Y.59, A:R.62, A:E.63, A:K.66, A:N.70, A:N.70, A:S.73, A:D.77, A:S.99, A:S.99, A:Y.116, A:E.152, A:E.152, A:R.155, A:R.155, A:Y.171, A:Y.171 Salt bridges: A:E.63, A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ghendler, Y. et al., Differential thymic selection outcomes stimulated by focal structural alteration in peptide/major histocompatibility complex ligands. Proc.Natl.Acad.Sci.USA (1998)

Release Date

1999-01-13

Peptides

MHC CLASS I H-2KB HEAVY CHAIN: A
BETA-2 MICROGLOBULIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC CLASS I H-2KB HEAVY CHAIN

BETA-2 MICROGLOBULIN

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