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SMTL ID : 1rca.1

STRUCTURE OF THE CRYSTALLINE COMPLEX OF DEOXYCYTIDYLYL-3',5'-GUANOSINE (3',5'-DCPDG) CO-CRYSTALISED WITH RIBONUCLEASE AT 1.9 ANGSTROMS RESOLUTION. RETROBINDING IN PANCREATIC RNASEA IS INDEPENDENT OF MODE OF INHIBITOR INTROMISSION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1:

2 residues within 4Å:

Chain A: R.85
Ligands: CGP.3

1 PLIP interactions:

1 interactions with chain A

Salt bridges: A:R.85

2 x CGP: 2'-DEOXYCYTIDINE-2'-DEOXYGUANOSINE-3',5'-MONOPHOSPHATE(Non-covalent)

CGP.2:	6 residues within 4Å: Chain A: Q.11, H.12, K.41, H.119, F.120 Ligands: CGP.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.11, A:K.41, A:K.41, A:F.120
CGP.3:	10 residues within 4Å: Chain A: H.12, V.43, N.44, T.45, R.85, F.120, D.121, A.122 Ligands: PO4.1, CGP.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.45, A:T.45, A:R.85 Water bridges: A:F.120

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Listgarten, J.N. et al., Structure of the crystalline complex of deoxycytidylyl-3',5'-guanosine (3',5'-dCpdG) cocrystallized with ribonuclease at 1.9 A resolution. Acta Crystallogr.,Sect.D (1995)

Release Date

1995-09-15

Peptides

RIBONUCLEASE A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

RIBONUCLEASE A

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