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SMTL ID : 1rnd.1

NEWLY OBSERVED BINDING MODE IN PANCREATIC RIBONUCLEASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1:

6 residues within 4Å:

Chain A: Q.11, H.12, K.41, H.119, F.120
Ligands: DGP.2

6 PLIP interactions:

6 interactions with chain A

Hydrogen bonds: A:Q.11, A:F.120
Water bridges: A:H.119
Salt bridges: A:H.12, A:K.41, A:H.119

1 x DGP: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE(Non-covalent)

DGP.2:

10 residues within 4Å:

Chain A: H.12, V.43, N.44, T.45, R.85, H.119, F.120, D.121, A.122
Ligands: SO4.1

3 PLIP interactions:

3 interactions with chain A

Hydrogen bonds: A:T.45, A:T.45
Salt bridges: A:R.85

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Aguilar, C.F. et al., Newly observed binding mode in pancreatic ribonuclease. J.Mol.Biol. (1992)

Release Date

1994-01-31

Peptides

RIBONUCLEASE A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

RIBONUCLEASE A

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