SMTL ID : 1vac.1

MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND CHICKEN OVALBUMIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-oligomer

Ligands

1 x SER- ILE- ILE- ASN- PHE- GLU- LYS- LEU: CHICKEN OVALBUMIN(Non-covalent)

SER-ILE-ILE-ASN-PHE-GLU-LYS-LEU.1: 28 residues within 4Å: Chain A: Y.7, V.9, E.24, Y.45, E.63, K.66, N.70, S.73, F.74, V.76, D.77, T.80, L.81, Y.84, V.97, S.99, Q.114, Y.116, Y.123, T.143, K.146, W.147, E.152, R.155, L.156, Y.159, W.167, Y.171 36 PLIP interactions: 36 interactions with chain A Hydrophobic interactions: A:Y.7, A:Y.7, A:Y.7, A:V.9, A:E.24, A:F.74, A:L.81, A:V.97, A:Y.123, A:T.143, A:W.147, A:L.156, A:Y.159, A:Y.159 Hydrogen bonds: A:Y.7, A:E.63, A:K.66, A:N.70, A:N.70, A:S.73, A:D.77, A:Y.84, A:R.155, A:R.155, A:Y.159, A:Y.159, A:Y.171, A:Y.171 Water bridges: A:E.63, A:E.63, A:Q.72, A:D.77, A:D.77, A:Y.116, A:E.152 Salt bridges: A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fremont, D.H. et al., Crystal structure of an H-2Kb-ovalbumin peptide complex reveals the interplay of primary and secondary anchor positions in the major histocompatibility complex binding groove. Proc.Natl.Acad.Sci.USA (1995)

Release Date

1996-06-20

Peptides

MHC CLASS I H-2KB HEAVY CHAIN: A
BETA-2 MICROGLOBULIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC CLASS I H-2KB HEAVY CHAIN

BETA-2 MICROGLOBULIN

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