SMTL ID : 1vad.1

MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND YEAST ALPHA-GLUCOSIDASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SER- ARG- ASP- HIS- SER- ARG- THR- PRO- MET: YEAST ALPHA-GLUCOSIDASE(Non-covalent)

SER-ARG-ASP-HIS-SER-ARG-THR-PRO-MET.1: 25 residues within 4Å: Chain A: Y.7, V.9, Y.22, E.24, Y.45, E.63, K.66, N.70, S.73, F.74, D.77, T.80, L.81, Y.84, I.95, Y.116, T.143, K.146, W.147, A.150, E.152, R.155, Y.159, W.167, Y.171 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:Y.7, A:K.66, A:T.143, A:A.150 Hydrogen bonds: A:Y.7, A:Y.7, A:Y.22, A:E.63, A:K.66, A:N.70, A:S.73, A:D.77, A:Y.116, A:E.152, A:R.155, A:W.167, A:Y.171 Water bridges: A:N.70, A:D.77, A:T.80, A:S.99, A:S.99, A:Q.114 Salt bridges: A:E.24, A:D.77, A:K.146, A:R.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fremont, D.H. et al., Crystal structure of an H-2Kb-ovalbumin peptide complex reveals the interplay of primary and secondary anchor positions in the major histocompatibility complex binding groove. Proc.Natl.Acad.Sci.USA (1995)

Release Date

1996-06-20

Peptides

MHC CLASS I H-2KB HEAVY CHAIN: A
BETA-2 MICROGLOBULIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC CLASS I H-2KB HEAVY CHAIN

BETA-2 MICROGLOBULIN

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