SMTL ID : 2p45.1

Complex of a camelid single-domain vhh antibody fragment with RNASE A at 1.1A resolution: SE5B-ORTHO-1 crystal form with five se-met sites (L4M, M34, M51, F68M, M83) in vhh scaffold.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

hetero-oligomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: Q.11, H.12, K.41, V.118, H.119, F.120 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.11, A:F.120, A:F.120 Water bridges: A:K.7, A:H.119 Salt bridges: A:H.12, A:K.41, A:H.119 SO4.2: 3 residues within 4Å: Chain A: T.87, G.88, S.89 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.88, A:S.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tereshko, V. et al., Toward chaperone-assisted crystallography: protein engineering enhancement of crystal packing and X-ray phasing capabilities of a camelid single-domain antibody (VHH) scaffold. Protein Sci. (2008)

Release Date

2008-03-11

Peptides

Ribonuclease pancreatic: A
ANTIBODY CAB-RN05: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ribonuclease pancreatic

ANTIBODY CAB-RN05

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