SMTL ID : 2vab.1

MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND SENDAI VIRUS NUCLEOPROTEIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PHE- ALA- PRO- GLY- ASN- TYR- PRO- ALA- LEU: SENDAI VIRUS NUCLEOPROTEIN(Non-covalent)

PHE-ALA-PRO-GLY-ASN-TYR-PRO-ALA-LEU.1: 24 residues within 4Å: Chain A: Y.7, V.9, Y.45, Y.59, R.62, E.63, K.66, N.70, S.73, F.74, D.77, T.80, L.81, Y.84, Q.114, Y.116, T.143, K.146, W.147, E.152, Y.159, T.163, W.167, Y.171 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:Y.7, A:L.81, A:T.143, A:E.152, A:Y.159, A:T.163, A:W.167, A:W.167 Hydrogen bonds: A:Y.7, A:Y.59, A:E.63, A:K.66, A:N.70, A:S.73, A:D.77, A:Y.171, A:Y.171 Water bridges: A:N.70, A:N.70, A:D.77, A:T.80, A:S.99 Salt bridges: A:K.146 pi-Stacking: A:F.74, A:W.167 pi-Cation interactions: A:K.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fremont, D.H. et al., Crystal structures of two viral peptides in complex with murine MHC class I H-2Kb. Science (1992)

Release Date

1996-06-20

Peptides

MHC CLASS I H-2KB HEAVY CHAIN: A
BETA-2 MICROGLOBULIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC CLASS I H-2KB HEAVY CHAIN

BETA-2 MICROGLOBULIN

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