SMTL ID : 3huj.1 (1 other biounit)

Crystal structure of human CD1d-alpha-Galactosylceramide in complex with semi-invariant NKT cell receptor

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.50 Å
Oligo State
hetero-oligomer
Ligands
1 x NDG- BMA: SUGAR (2-MER)(Post Translational Modification)
1 x NAG: SUGAR (N-ACETYL-D-GLUCOSAMINE)(Post Translational Modification)
1 x AGH: SUGAR (N-{(1S,2R,3S)-1-[(ALPHA-D-GALACTOPYRANOSYLOXY)METHYL]-2,3-DIHYDROXYHEPTADECYL}HEXACOSANAMIDE)(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Pellicci, D.G. et al., Differential recognition of CD1d-alpha-galactosyl ceramide by the V beta 8.2 and V beta 7 semi-invariant NKT T cell receptors. Immunity (2009)
Peptides
T-cell surface glycoprotein CD1d: A
Beta-2-microglobulin: B
NKT15 T cell receptor alpha-chain: C
NKT15 T cell receptor beta-chain: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
G
D
H

T-cell surface glycoprotein CD1d

Beta-2-microglobulin

NKT15 T cell receptor alpha-chain

NKT15 T cell receptor beta-chain

Related Entries With Identical Sequence

1a1m.1 | 1a1n.1 | 1a1o.1 | 1a6z.1 | 1a6z.2 | 1agb.1 | 1agc.1 | 1agd.1 | 1age.1 | 1agf.1 | 1akj.1 | 1c16.1 | 1c16.2 | 1c16.3 | 1c16.4 | 1c16.5 | 1de4.1 | 1de4.2 | 1e27.1 | 1e28.1 | 1exu.1 | 1hsa.1 | 1hsa.2 | 1hsb.1 | 1m05.1 | 1m05.2 | 1m6o.1 | 1mi5.1 | 1n2r.1 | 1onq.1  more...