SMTL ID : 7edo.2 (1 other biounit)

First insight into marsupial MHC I peptide presentation: immune features of lower mammals paralleled with bats

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CYS- ASN- VAL- THR- LEU- ASN- TYR- PRO: CYS-ASN-VAL-THR-LEU-ASN-TYR-PRO(Non-covalent)

CYS-ASN-VAL-THR-LEU-ASN-TYR-PRO.1: 23 residues within 4Å: Chain A: Y.28, Y.30, E.66, Q.87, I.90, L.91, R.93, N.94, V.97, F.98, V.100, G.101, T.104, L.105, Y.108, Y.123, T.167, K.170, W.171, I.177, W.181, Y.184, Y.196 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:Y.30, A:F.98, A:V.100, A:V.100, A:L.105, A:Y.123, A:Y.123, A:T.167, A:W.181, A:Y.184 Hydrogen bonds: A:Y.28, A:Y.30, A:Q.87, A:Q.87, A:Q.87, A:R.93, A:R.93, A:N.94, A:N.94, A:T.104, A:Y.123, A:Y.123, A:T.167, A:Y.184, A:Y.196 Salt bridges: A:K.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, P. et al., Peptide Presentations of Marsupial MHC Class I Visualize Immune Features of Lower Mammals Paralleled with Bats. J Immunol. (2021)

Release Date

2021-08-11

Peptides

MHC class I antigen: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

MHC class I antigen

Beta-2-microglobulin

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