SMTL ID : 3tzv.1 (1 other biounit)

Crystal structure of an iNKT TCR in complex with CD1d-lysophosphatidylcholine

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.06 Å
Oligo State
hetero-oligomer
Ligands
1 x NAG: N-ACETYL-D-GLUCOSAMINE(Post Translational Modification)
1 x FUC: ALPHA-L-FUCOSE(Non-covalent)
1 x LSC: (4R,7R,18E)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphaheptacos-18-en-1-aminium 4-oxide(Non-covalent)
1 x HEX: HEXANE(Non-covalent)
1 x D12: DODECANE(Non-covalent)
1 x GOL: GLYCEROL(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Lopez-Sagaseta, J. et al., Lysophospholipid presentation by CD1d and recognition by a human Natural Killer T-cell receptor. Embo J. (2012)
Peptides
Antigen-presenting glycoprotein CD1d: A
Beta-2-microglobulin: B
Invariant Natural Killer T Cell Receptor chain A: C
Invariant Natural Killer T Cell Receptor chain B: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
D
C
G
D
H

Antigen-presenting glycoprotein CD1d

Beta-2-microglobulin

Invariant Natural Killer T Cell Receptor chain A

Invariant Natural Killer T Cell Receptor chain B

Related Entries With Identical Sequence

1a1m.1 | 1a1n.1 | 1a1o.1 | 1a6z.1 | 1a6z.2 | 1agb.1 | 1agc.1 | 1agd.1 | 1age.1 | 1agf.1 | 1akj.1 | 1c16.1 | 1c16.2 | 1c16.3 | 1c16.4 | 1c16.5 | 1de4.1 | 1de4.2 | 1e27.1 | 1e28.1 | 1exu.1 | 1hsa.1 | 1hsa.2 | 1hsb.1 | 1m05.1 | 1m05.2 | 1m6o.1 | 1mi5.1 | 1n2r.1 | 1onq.1  more...