SMTL ID : 3vwj.1

Ternary crystal structure of the human NKT TCR-CD1d-C20:2 complex

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.09 Å
Oligo State
hetero-oligomer
Ligands
2 x NAG: SUGAR (N-ACETYL-D-GLUCOSAMINE)(Post Translational Modification)
1 x DB3: (11Z,14E)-N-[(2S,3S,4R)-1-(ALPHA-D-GALACTOPYRANOSYLOXY)-3,4-DIHYDROXYOCTADECAN-2-YL]ICOSA-11,14-DIENAMIDE(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Wun, K.S. et al., Human and mouse type I natural killer T cell antigen receptors exhibit different fine specificities for CD1d-antigen complex. J.Biol.Chem. (2012)
Peptides
Antigen-presenting glycoprotein CD1d: A
Beta-2-microglobulin: B
NKT15 T cell receptor alpha-chain: C
NKT15 T cell receptor beta-chain: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D

Antigen-presenting glycoprotein CD1d

Beta-2-microglobulin

NKT15 T cell receptor alpha-chain

NKT15 T cell receptor beta-chain

Related Entries With Identical Sequence

1a1m.1 | 1a1n.1 | 1a1o.1 | 1a6z.1 | 1a6z.2 | 1agb.1 | 1agc.1 | 1agd.1 | 1age.1 | 1agf.1 | 1akj.1 | 1c16.1 | 1c16.2 | 1c16.3 | 1c16.4 | 1c16.5 | 1de4.1 | 1de4.2 | 1e27.1 | 1e28.1 | 1exu.1 | 1hsa.1 | 1hsa.2 | 1hsb.1 | 1m05.1 | 1m05.2 | 1m6o.1 | 1mi5.1 | 1n2r.1 | 1onq.1  more...