- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x CO3: CARBONATE ION(Non-functional Binders)
- 12 x FE: FE (III) ION(Non-covalent)
FE.2: 4 residues within 4Å:- Chain B: Y.108, H.160, H.162
- Ligands: CO3.1
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:Y.108, B:H.160, B:H.162
FE.5: 4 residues within 4Å:- Chain D: Y.108, H.160, H.162
- Ligands: CO3.4
3 PLIP interactions:3 interactions with chain D- Metal complexes: D:Y.108, D:H.160, D:H.162
FE.8: 4 residues within 4Å:- Chain F: Y.108, H.160, H.162
- Ligands: CO3.7
3 PLIP interactions:3 interactions with chain F- Metal complexes: F:Y.108, F:H.160, F:H.162
FE.11: 4 residues within 4Å:- Chain H: Y.108, H.160, H.162
- Ligands: CO3.10
3 PLIP interactions:3 interactions with chain H- Metal complexes: H:Y.108, H:H.160, H:H.162
FE.14: 4 residues within 4Å:- Chain J: Y.108, H.160, H.162
- Ligands: CO3.13
3 PLIP interactions:3 interactions with chain J- Metal complexes: J:Y.108, J:H.160, J:H.162
FE.17: 4 residues within 4Å:- Chain L: Y.108, H.160, H.162
- Ligands: CO3.16
3 PLIP interactions:3 interactions with chain L- Metal complexes: L:Y.108, L:H.160, L:H.162
FE.20: 4 residues within 4Å:- Chain N: Y.108, H.160, H.162
- Ligands: CO3.19
3 PLIP interactions:3 interactions with chain N- Metal complexes: N:Y.108, N:H.160, N:H.162
FE.23: 4 residues within 4Å:- Chain P: Y.108, H.160, H.162
- Ligands: CO3.22
3 PLIP interactions:3 interactions with chain P- Metal complexes: P:Y.108, P:H.160, P:H.162
FE.26: 4 residues within 4Å:- Chain R: Y.108, H.160, H.162
- Ligands: CO3.25
3 PLIP interactions:3 interactions with chain R- Metal complexes: R:Y.108, R:H.160, R:H.162
FE.29: 4 residues within 4Å:- Chain T: Y.108, H.160, H.162
- Ligands: CO3.28
3 PLIP interactions:3 interactions with chain T- Metal complexes: T:Y.108, T:H.160, T:H.162
FE.32: 4 residues within 4Å:- Chain V: Y.108, H.160, H.162
- Ligands: CO3.31
3 PLIP interactions:3 interactions with chain V- Metal complexes: V:Y.108, V:H.160, V:H.162
FE.35: 4 residues within 4Å:- Chain X: Y.108, H.160, H.162
- Ligands: CO3.34
3 PLIP interactions:3 interactions with chain X- Metal complexes: X:Y.108, X:H.160, X:H.162
- 12 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
BME.3: 4 residues within 4Å:- Chain B: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:S.138
BME.6: 4 residues within 4Å:- Chain D: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:S.138
BME.9: 4 residues within 4Å:- Chain F: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:S.138
BME.12: 4 residues within 4Å:- Chain H: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain H- Hydrogen bonds: H:S.138
BME.15: 4 residues within 4Å:- Chain J: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain J- Hydrogen bonds: J:S.138
BME.18: 4 residues within 4Å:- Chain L: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain L- Hydrogen bonds: L:S.138
BME.21: 4 residues within 4Å:- Chain N: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain N- Hydrogen bonds: N:S.138
BME.24: 4 residues within 4Å:- Chain P: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain P- Hydrogen bonds: P:S.138
BME.27: 4 residues within 4Å:- Chain R: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain R- Hydrogen bonds: R:S.138
BME.30: 4 residues within 4Å:- Chain T: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain T- Hydrogen bonds: T:S.138
BME.33: 4 residues within 4Å:- Chain V: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain V- Hydrogen bonds: V:S.138
BME.36: 4 residues within 4Å:- Chain X: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain X- Hydrogen bonds: X:S.138
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Frazee, R.W. et al., The axial tyrosinate Fe3+ ligand in protocatechuate 3,4-dioxygenase influences substrate binding and product release: evidence for new reaction cycle intermediates. Biochemistry (1998)
- Release Date
- 1998-05-27
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
BE
CG
DI
EK
FM
AO
BQ
CS
DU
EW
FB
MD
NF
OH
PJ
QL
RN
MP
NR
OT
PV
QX
R
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x CO3: CARBONATE ION(Non-functional Binders)
- 12 x FE: FE (III) ION(Non-covalent)
- 12 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Frazee, R.W. et al., The axial tyrosinate Fe3+ ligand in protocatechuate 3,4-dioxygenase influences substrate binding and product release: evidence for new reaction cycle intermediates. Biochemistry (1998)
- Release Date
- 1998-05-27
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
BE
CG
DI
EK
FM
AO
BQ
CS
DU
EW
FB
MD
NF
OH
PJ
QL
RN
MP
NR
OT
PV
QX
R