- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.06 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)
- 12 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
BME.2: 5 residues within 4Å:- Chain B: H.61, C.129, L.130, Y.137, S.138
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:S.138
BME.5: 4 residues within 4Å:- Chain D: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:S.138
BME.8: 4 residues within 4Å:- Chain F: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:S.138
BME.11: 4 residues within 4Å:- Chain H: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain H- Hydrogen bonds: H:S.138
BME.14: 4 residues within 4Å:- Chain J: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain J- Hydrogen bonds: J:S.138
BME.17: 4 residues within 4Å:- Chain L: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain L- Hydrogen bonds: L:S.138
BME.20: 5 residues within 4Å:- Chain N: H.61, C.129, L.130, Y.137, S.138
1 PLIP interactions:1 interactions with chain N- Hydrogen bonds: N:S.138
BME.23: 4 residues within 4Å:- Chain P: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain P- Hydrogen bonds: P:S.138
BME.26: 4 residues within 4Å:- Chain R: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain R- Hydrogen bonds: R:S.138
BME.29: 4 residues within 4Å:- Chain T: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain T- Hydrogen bonds: T:S.138
BME.32: 4 residues within 4Å:- Chain V: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain V- Hydrogen bonds: V:S.138
BME.35: 4 residues within 4Å:- Chain X: H.61, C.129, L.130, S.138
1 PLIP interactions:1 interactions with chain X- Hydrogen bonds: X:S.138
- 12 x 3HP: 3-HYDROXYPHENYLACETATE(Non-covalent)
3HP.3: 13 residues within 4Å:- Chain A: T.12, G.14, P.15, Y.16
- Chain B: Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.1
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:Y.147, B:W.149, B:I.191, A:T.12, A:P.15
- Water bridges: A:Y.16
3HP.6: 12 residues within 4Å:- Chain C: T.12, G.14, P.15
- Chain D: Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.4
6 PLIP interactions:3 interactions with chain D, 3 interactions with chain C- Hydrophobic interactions: D:Y.147, D:W.149, D:I.191, C:T.12
- Water bridges: C:Y.16, C:R.133
3HP.9: 11 residues within 4Å:- Chain E: T.12, G.14, P.15
- Chain F: Y.108, Y.147, W.149, R.157, H.160, H.162, I.191
- Ligands: FE.7
6 PLIP interactions:3 interactions with chain E, 3 interactions with chain F- Hydrophobic interactions: E:T.12, E:P.15, F:Y.147, F:W.149, F:I.191
- Water bridges: E:Y.16
3HP.12: 12 residues within 4Å:- Chain G: G.14, P.15, Y.16
- Chain H: Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.10
6 PLIP interactions:3 interactions with chain H, 3 interactions with chain G- Hydrophobic interactions: H:Y.147, H:W.149, H:I.191, G:P.15
- Water bridges: G:Y.16, G:R.133
3HP.15: 12 residues within 4Å:- Chain I: T.12, G.14, P.15, Y.16
- Chain J: Y.108, Y.147, W.149, R.157, H.160, H.162, I.191
- Ligands: FE.13
6 PLIP interactions:3 interactions with chain J, 3 interactions with chain I- Hydrophobic interactions: J:Y.147, J:W.149, J:I.191, I:T.12, I:P.15
- Water bridges: I:Y.16
3HP.18: 13 residues within 4Å:- Chain K: T.12, G.14, P.15, Y.16, R.133
- Chain L: Y.108, Y.147, W.149, R.157, H.160, H.162, I.191
- Ligands: FE.16
7 PLIP interactions:4 interactions with chain K, 3 interactions with chain L- Hydrophobic interactions: K:T.12, K:P.15, L:Y.147, L:W.149, L:I.191
- Water bridges: K:Y.16, K:R.133
3HP.21: 13 residues within 4Å:- Chain M: T.12, G.14, P.15, Y.16
- Chain N: Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.19
6 PLIP interactions:3 interactions with chain N, 3 interactions with chain M- Hydrophobic interactions: N:Y.147, N:W.149, N:I.191, M:T.12, M:P.15
- Water bridges: M:Y.16
3HP.24: 12 residues within 4Å:- Chain O: T.12, G.14, P.15
- Chain P: Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.22
6 PLIP interactions:3 interactions with chain O, 3 interactions with chain P- Hydrophobic interactions: O:T.12, P:Y.147, P:W.149, P:I.191
- Water bridges: O:Y.16, O:R.133
3HP.27: 11 residues within 4Å:- Chain Q: T.12, G.14, P.15
- Chain R: Y.108, Y.147, W.149, R.157, H.160, H.162, I.191
- Ligands: FE.25
6 PLIP interactions:3 interactions with chain R, 3 interactions with chain Q- Hydrophobic interactions: R:Y.147, R:W.149, R:I.191, Q:T.12, Q:P.15
- Water bridges: Q:Y.16
3HP.30: 12 residues within 4Å:- Chain S: G.14, P.15, Y.16
- Chain T: Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.28
6 PLIP interactions:3 interactions with chain T, 3 interactions with chain S- Hydrophobic interactions: T:Y.147, T:W.149, T:I.191, S:P.15
- Water bridges: S:Y.16, S:R.133
3HP.33: 12 residues within 4Å:- Chain U: T.12, G.14, P.15, Y.16
- Chain V: Y.108, Y.147, W.149, R.157, H.160, H.162, I.191
- Ligands: FE.31
6 PLIP interactions:3 interactions with chain U, 3 interactions with chain V- Hydrophobic interactions: U:T.12, U:P.15, V:Y.147, V:W.149, V:I.191
- Water bridges: U:Y.16
3HP.36: 13 residues within 4Å:- Chain W: T.12, G.14, P.15, Y.16, R.133
- Chain X: Y.108, Y.147, W.149, R.157, H.160, H.162, I.191
- Ligands: FE.34
7 PLIP interactions:4 interactions with chain W, 3 interactions with chain X- Hydrophobic interactions: W:T.12, W:P.15, X:Y.147, X:W.149, X:I.191
- Water bridges: W:Y.16, W:R.133
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Orville, A.M. et al., Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site. Biochemistry (1997)
- Release Date
- 1998-04-29
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
BE
CG
DI
EK
FM
AO
BQ
CS
DU
EW
FB
MD
NF
OH
PJ
QL
RN
MP
NR
OT
PV
QX
R
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.06 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)
- 12 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- 12 x 3HP: 3-HYDROXYPHENYLACETATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Orville, A.M. et al., Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site. Biochemistry (1997)
- Release Date
- 1998-04-29
- Peptides
- PROTOCATECHUATE 3,4-DIOXYGENASE: ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
BE
CG
DI
EK
FM
AO
BQ
CS
DU
EW
FB
MD
NF
OH
PJ
QL
RN
MP
NR
OT
PV
QX
R