- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)(Non-functional Binders)
- 24 x CHB: 3-CHLORO-4-HYDROXYBENZOIC ACID(Non-functional Binders)(Non-covalent)
CHB.2: 14 residues within 4Å:- Chain A: T.12, G.14, P.15, R.133
- Chain B: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.1
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:Y.147, B:W.149, B:I.191, A:P.15
- Hydrogen bonds: B:R.157
- Halogen bonds: B:Q.177
- Salt bridges: A:R.133
CHB.3: 4 residues within 4Å:- Chain B: L.20, R.33
- Chain F: P.22, I.28
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain F- Hydrophobic interactions: B:L.20, F:P.22
- pi-Cation interactions: B:R.33
- Water bridges: F:R.33
CHB.5: 14 residues within 4Å:- Chain C: T.12, G.14, P.15, R.133
- Chain D: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.4
8 PLIP interactions:6 interactions with chain D, 2 interactions with chain C- Hydrophobic interactions: D:Y.147, D:W.149, D:I.191, C:P.15
- Hydrogen bonds: D:Y.24, D:R.157
- Halogen bonds: D:Q.177
- Salt bridges: C:R.133
CHB.6: 6 residues within 4Å:- Chain B: L.20, P.22, I.28, R.33
- Chain D: L.20, R.33
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain D- Hydrophobic interactions: B:P.22, D:L.20
- Water bridges: B:R.33
- pi-Cation interactions: D:R.33
CHB.8: 14 residues within 4Å:- Chain E: T.12, G.14, P.15, R.133
- Chain F: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.7
7 PLIP interactions:5 interactions with chain F, 2 interactions with chain E- Hydrophobic interactions: F:Y.147, F:W.149, F:I.191, E:P.15
- Hydrogen bonds: F:R.157
- Halogen bonds: F:Q.177
- Salt bridges: E:R.133
CHB.9: 4 residues within 4Å:- Chain D: P.22, I.28
- Chain F: L.20, R.33
4 PLIP interactions:1 interactions with chain F, 3 interactions with chain D- Hydrophobic interactions: F:L.20, D:P.22, D:P.22
- Water bridges: D:R.33
CHB.11: 14 residues within 4Å:- Chain G: T.12, G.14, P.15, R.133
- Chain H: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.10
8 PLIP interactions:6 interactions with chain H, 2 interactions with chain G- Hydrophobic interactions: H:Y.147, H:W.149, H:R.157, H:I.191, G:P.15
- Hydrogen bonds: H:R.157
- Halogen bonds: H:Q.177
- Salt bridges: G:R.133
CHB.12: 5 residues within 4Å:- Chain H: L.20, R.33
- Chain L: P.22, I.28, R.33
4 PLIP interactions:2 interactions with chain H, 2 interactions with chain L- Hydrophobic interactions: H:L.20, L:P.22, L:I.28
- pi-Cation interactions: H:R.33
CHB.14: 14 residues within 4Å:- Chain I: T.12, G.14, P.15, R.133
- Chain J: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.13
8 PLIP interactions:6 interactions with chain J, 2 interactions with chain I- Hydrophobic interactions: J:Y.147, J:W.149, J:I.191, I:P.15
- Hydrogen bonds: J:Y.24, J:R.157
- Halogen bonds: J:Q.177
- Salt bridges: I:R.133
CHB.15: 4 residues within 4Å:- Chain H: P.22, I.28
- Chain J: L.20, R.33
5 PLIP interactions:3 interactions with chain H, 2 interactions with chain J- Hydrophobic interactions: H:P.22, H:P.22, J:L.20
- Water bridges: H:R.33
- pi-Cation interactions: J:R.33
CHB.17: 14 residues within 4Å:- Chain K: T.12, G.14, P.15, R.133
- Chain L: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.16
8 PLIP interactions:6 interactions with chain L, 2 interactions with chain K- Hydrophobic interactions: L:Y.147, L:W.149, L:R.157, L:I.191, K:P.15
- Hydrogen bonds: L:R.157
- Halogen bonds: L:Q.177
- Salt bridges: K:R.133
CHB.18: 4 residues within 4Å:- Chain J: L.20, P.22, I.28
- Chain L: R.33
4 PLIP interactions:4 interactions with chain J- Hydrophobic interactions: J:P.22, J:P.22, J:I.28
- Water bridges: J:R.33
CHB.20: 14 residues within 4Å:- Chain M: T.12, G.14, P.15, R.133
- Chain N: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.19
8 PLIP interactions:2 interactions with chain M, 6 interactions with chain N- Hydrophobic interactions: M:P.15, N:Y.147, N:W.149, N:I.191
- Salt bridges: M:R.133
- Hydrogen bonds: N:Y.24, N:R.157
- Halogen bonds: N:Q.177
CHB.21: 4 residues within 4Å:- Chain N: L.20, R.33
- Chain R: P.22, I.28
4 PLIP interactions:2 interactions with chain R, 2 interactions with chain N- Hydrophobic interactions: R:P.22, N:L.20
- Water bridges: R:R.33
- pi-Cation interactions: N:R.33
CHB.23: 14 residues within 4Å:- Chain O: T.12, G.14, P.15, R.133
- Chain P: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.22
7 PLIP interactions:5 interactions with chain P, 2 interactions with chain O- Hydrophobic interactions: P:Y.147, P:W.149, P:I.191, O:P.15
- Hydrogen bonds: P:R.157
- Halogen bonds: P:Q.177
- Salt bridges: O:R.133
CHB.24: 6 residues within 4Å:- Chain N: L.20, P.22, I.28, R.33
- Chain P: L.20, R.33
4 PLIP interactions:2 interactions with chain P, 2 interactions with chain N- Hydrophobic interactions: P:L.20, N:P.22
- pi-Cation interactions: P:R.33
- Water bridges: N:R.33
CHB.26: 14 residues within 4Å:- Chain Q: T.12, G.14, P.15, R.133
- Chain R: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.25
8 PLIP interactions:6 interactions with chain R, 2 interactions with chain Q- Hydrophobic interactions: R:Y.147, R:W.149, R:I.191, Q:P.15
- Hydrogen bonds: R:Y.24, R:R.157
- Halogen bonds: R:Q.177
- Salt bridges: Q:R.133
CHB.27: 4 residues within 4Å:- Chain P: P.22, I.28
- Chain R: L.20, R.33
4 PLIP interactions:1 interactions with chain R, 3 interactions with chain P- Hydrophobic interactions: R:L.20, P:P.22, P:P.22
- Water bridges: P:R.33
CHB.29: 14 residues within 4Å:- Chain S: T.12, G.14, P.15, R.133
- Chain T: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.28
9 PLIP interactions:7 interactions with chain T, 2 interactions with chain S- Hydrophobic interactions: T:Y.147, T:W.149, T:R.157, T:I.191, S:P.15
- Hydrogen bonds: T:Y.24, T:R.157
- Halogen bonds: T:Q.177
- Salt bridges: S:R.133
CHB.30: 5 residues within 4Å:- Chain T: L.20, R.33
- Chain X: P.22, I.28, R.33
4 PLIP interactions:2 interactions with chain T, 2 interactions with chain X- Hydrophobic interactions: T:L.20, X:P.22, X:I.28
- pi-Cation interactions: T:R.33
CHB.32: 14 residues within 4Å:- Chain U: T.12, G.14, P.15, R.133
- Chain V: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.31
7 PLIP interactions:2 interactions with chain U, 5 interactions with chain V- Hydrophobic interactions: U:P.15, V:Y.147, V:W.149, V:I.191
- Salt bridges: U:R.133
- Hydrogen bonds: V:R.157
- Halogen bonds: V:Q.177
CHB.33: 4 residues within 4Å:- Chain T: P.22, I.28
- Chain V: L.20, R.33
5 PLIP interactions:2 interactions with chain V, 3 interactions with chain T- Hydrophobic interactions: V:L.20, T:P.22, T:P.22
- pi-Cation interactions: V:R.33
- Water bridges: T:R.33
CHB.35: 14 residues within 4Å:- Chain W: T.12, G.14, P.15, R.133
- Chain X: Y.24, Y.108, Y.147, W.149, R.157, H.160, H.162, Q.177, I.191
- Ligands: FE.34
9 PLIP interactions:2 interactions with chain W, 7 interactions with chain X- Hydrophobic interactions: W:P.15, X:Y.147, X:W.149, X:R.157, X:I.191
- Salt bridges: W:R.133
- Hydrogen bonds: X:Y.24, X:R.157
- Halogen bonds: X:Q.177
CHB.36: 4 residues within 4Å:- Chain V: L.20, P.22, I.28
- Chain X: R.33
4 PLIP interactions:4 interactions with chain V- Hydrophobic interactions: V:P.22, V:P.22, V:I.28
- Water bridges: V:R.33
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Orville, A.M. et al., Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site. Biochemistry (1997)
- Release Date
- 1998-01-07
- Peptides
- Protocatechuate 3,4-dioxygenase alpha chain: ACEGIKMOQSUW
Protocatechuate 3,4-dioxygenase beta chain: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
BE
CG
DI
EK
FM
AO
BQ
CS
DU
EW
FB
MD
NF
OH
PJ
QL
RN
MP
NR
OT
PV
QX
R
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- hetero-12-12-mer
- Ligands
- 12 x FE: FE (III) ION(Non-covalent)(Non-functional Binders)
- 24 x CHB: 3-CHLORO-4-HYDROXYBENZOIC ACID(Non-functional Binders)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Orville, A.M. et al., Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site. Biochemistry (1997)
- Release Date
- 1998-01-07
- Peptides
- Protocatechuate 3,4-dioxygenase alpha chain: ACEGIKMOQSUW
Protocatechuate 3,4-dioxygenase beta chain: BDFHJLNPRTVX - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
BE
CG
DI
EK
FM
AO
BQ
CS
DU
EW
FB
MD
NF
OH
PJ
QL
RN
MP
NR
OT
PV
QX
R