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SMTL ID : 4j6a.1

Crystal structure of Ribonuclease A soaked in 40% 2,2,2-Trifluoroethanol: One of twelve in MSCS set

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1:	5 residues within 4Å: Chain A: Q.11, H.12, K.41, H.119, F.120 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.11, A:F.120 Water bridges: A:K.7, A:F.120 Salt bridges: A:H.12, A:K.41, A:H.119
SO4.4:	5 residues within 4Å: Chain B: Q.11, H.12, K.41, H.119, F.120 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Q.11, B:F.120 Water bridges: B:K.7, B:F.120 Salt bridges: B:H.12, B:K.41, B:H.119

4 x ETF: TRIFLUOROETHANOL(Non-covalent)

ETF.2:	3 residues within 4Å: Chain A: S.22, S.23 Ligands: ETF.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.23
ETF.3:	6 residues within 4Å: Chain A: A.20, S.21, S.22, S.23, T.99 Ligands: ETF.2 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.101
ETF.5:	3 residues within 4Å: Chain B: S.22, S.23 Ligands: ETF.6 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.23
ETF.6:	6 residues within 4Å: Chain B: A.20, S.21, S.22, S.23, T.99 Ligands: ETF.5 1 PLIP interactions: 1 interactions with chain B Water bridges: B:Q.101

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Kearney, B.M. et al., DRoP: A program for analysis of water structure on protein surfaces. to be published

Release Date

2014-01-22

Peptides

Ribonuclease pancreatic: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Ribonuclease pancreatic

Toggle Identical (AB)

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